Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 5.3e-111 404.4 216 100.0
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 9.4e-108 393.7 216 97.2
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 7.2e-92 340.9 216 87.0
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 2.7e-91 339.0 216 87.0
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 1.8e-90 336.3 216 86.6
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 8.3e-88 327.4 242 78.5
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 8.6e-77 290.8 203 78.3
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 9.8e-73 277.3 198 78.3
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 6.4e-72 274.6 195 76.9
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 8.3e-72 274.2 200 76.5
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 8.3e-72 274.2 202 74.8
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.1e-71 273.9 213 70.4
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.4e-71 273.5 213 75.1
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 3.2e-71 272.3 213 71.4
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 9.2e-71 270.8 211 73.0
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 9.2e-71 270.8 202 75.7
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 3.5e-70 268.9 215 70.7
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 1.0e-69 267.3 197 75.1
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 1.3e-69 266.9 209 70.3
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 1.7e-69 266.5 198 74.2
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.7e-69 266.5 208 69.7
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 2.3e-69 266.2 201 73.1
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 3.9e-69 265.4 210 70.5
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 6.6e-69 264.6 214 68.7
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 6.6e-69 264.6 212 69.3
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 6.6e-69 264.6 215 71.2
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 1.1e-68 263.8 193 75.6
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.1e-68 263.8 202 71.8
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 1.5e-68 263.5 211 69.7
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 3.3e-68 262.3 204 70.6
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 3.3e-68 262.3 213 71.4
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 1.2e-67 260.4 207 70.5
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 1.6e-67 260.0 205 70.2
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 2.8e-67 259.2 195 71.8
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 2.8e-67 259.2 214 68.7
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 4.7e-67 258.5 205 68.3
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 6.2e-67 258.1 189 75.7
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 1.0e-66 257.3 214 67.3
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 1.0e-66 257.3 205 70.2
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 1.4e-66 256.9 195 71.8
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 1.8e-66 256.5 195 71.3
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.8e-66 256.5 195 71.3
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 4.0e-66 255.4 210 70.5
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 5.2e-66 255.0 200 69.5
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 6.8e-66 254.6 203 71.9
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 1.2e-65 253.8 202 69.3
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 2.0e-65 253.1 212 67.9
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 2.0e-65 253.1 205 69.3
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 2.6e-65 252.7 211 70.1
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 5.8e-65 251.5 214 66.4
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 7.5e-65 251.1 237 62.0
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 9.8e-65 250.8 204 69.1
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 1.3e-64 250.4 203 70.9
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 1.3e-64 250.4 198 69.2
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 1.7e-64 250.0 202 68.3
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 2.9e-64 249.2 203 70.0
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.9e-64 248.4 209 68.9
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 8.3e-64 247.7 216 63.4
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 1.9e-63 246.5 212 66.0
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 2.4e-63 246.1 202 67.3
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 5.4e-63 245.0 197 70.6
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 5.4e-63 245.0 201 68.2
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 7.0e-63 244.6 198 67.7
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 2.0e-62 243.0 202 66.8
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 6.0e-62 241.5 202 66.3
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 6.0e-62 241.5 199 68.8
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.0e-61 240.7 188 72.3
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 3.9e-61 238.8 207 66.7
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 8.6e-61 237.7 194 67.5
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 1.6e-59 233.4 200 67.0
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 6.2e-59 231.5 208 64.4
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 8.1e-59 231.1 205 64.9
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 8.1e-59 231.1 205 64.9
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 8.1e-59 231.1 205 64.9
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 8.1e-59 231.1 206 66.0
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 1.8e-58 229.9 201 67.7
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 4.0e-58 228.8 197 66.0
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 6.8e-58 228.0 203 65.5
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 8.9e-58 227.6 199 67.3
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 1.2e-57 227.3 202 64.4
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 2.0e-57 226.5 219 61.6
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 7.5e-57 224.6 218 61.9
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 7.5e-57 224.6 203 65.0
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.3e-56 223.8 197 65.5
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 2.9e-56 222.6 234 59.0
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 6.4e-56 221.5 200 64.0
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 8.3e-56 221.1 199 63.3
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 1.1e-55 220.7 202 62.9
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 1.4e-55 220.3 202 62.9
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 4.1e-55 218.8 209 63.6
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 9.2e-55 217.6 199 64.3
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.2e-54 217.2 200 63.5
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.9e-53 212.2 219 58.4
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.5e-52 210.3 177 64.4
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 1.9e-52 209.9 208 61.1
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 5.6e-52 208.4 165 67.3
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 7.3e-52 208.0 168 68.5
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 1.6e-51 206.8 155 69.7
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 2.8e-51 206.1 247 54.3
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 1.8e-50 203.4 181 61.9
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 3.4e-49 199.1 163 69.3
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 7.6e-49 198.0 163 69.3
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 9.9e-49 197.6 216 55.1
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.9e-48 196.1 160 71.2
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 1.7e-45 186.8 196 58.2
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 1.5e-44 183.7 183 58.5
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.5e-44 183.7 207 57.5
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 3.3e-44 182.6 126 77.0
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 7.3e-44 181.4 143 69.2
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 9.6e-44 181.0 132 71.2
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 2.8e-43 179.5 137 73.0
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 8.1e-43 177.9 137 73.0
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 1.3e-40 170.6 143 65.7
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 1.9e-39 166.8 124 67.7
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 2.8e-35 152.9 122 69.7
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 6.4e-32 141.7 113 67.3
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.9e-28 130.2 99 70.7
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 5.6e-28 128.6 187 41.7
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 9.6e-28 127.9 121 56.2
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 6.2e-27 125.2 188 39.9
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.1e-26 124.4 126 55.6
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.1e-26 124.4 114 65.8
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 3.1e-26 122.9 114 61.4
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 5.3e-26 122.1 114 64.9
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.3e-24 117.5 141 52.5
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.3e-24 117.5 114 63.2
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 3.2e-23 112.8 151 49.7
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 5.5e-23 112.1 203 36.9
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 3.5e-22 109.4 64 87.5
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 7.4e-20 101.7 78 66.7
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 1.3e-19 100.9 82 61.0
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 6.9e-18 95.1 141 38.3
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.7e-16 90.5 68 73.5
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 4.9e-16 89.0 72 63.9
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 4.9e-16 89.0 125 38.4
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 4.1e-10 69.3 82 48.8
HanXRQChr04g0110971 Helianthus annuus HOM05D000316 ORTHO05D012803 1.6e-06 57.4 66 53.0


User provided reference genes

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