Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.1e-63 246.5 126 100.0
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.5e-36 156.4 98 84.7
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 7.3e-36 154.1 127 65.4
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.5e-33 146.4 127 64.6
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.3e-28 128.6 108 70.4
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.5e-20 103.2 119 51.3
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.6e-19 99.8 124 45.2
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 9.0e-18 94.0 101 50.5
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 4.9e-16 88.2 119 46.2
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 6.4e-16 87.8 129 45.7
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 7.1e-15 84.3 118 43.2
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.2e-14 83.6 102 46.1
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 1.2e-14 83.6 93 51.6
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.6e-14 83.2 96 46.9
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.6e-14 83.2 98 48.0
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 2.1e-14 82.8 105 42.9
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 3.5e-14 82.0 92 47.8
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 3.5e-14 82.0 92 47.8
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 7.9e-14 80.9 125 37.6
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 1.0e-13 80.5 129 45.0
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.3e-13 80.1 112 42.9
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.3e-13 80.1 112 42.0
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.7e-13 79.7 95 51.6
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 2.3e-13 79.3 98 46.9
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 3.0e-13 79.0 92 48.9
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 8.7e-13 77.4 94 48.9
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 8.7e-13 77.4 94 45.7
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.1e-12 77.0 122 41.8
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.9e-12 76.3 122 41.8
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 3.3e-12 75.5 129 40.3
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 3.3e-12 75.5 129 40.3
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 4.3e-12 75.1 127 37.8
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 9.6e-12 73.9 131 42.0
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.6e-11 73.2 132 40.2
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 2.1e-11 72.8 104 42.3
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.8e-11 72.4 94 43.6
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.8e-11 72.4 129 41.1
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 3.6e-11 72.0 112 38.4
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.6e-11 72.0 132 41.7
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 4.8e-11 71.6 98 41.8
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 4.8e-11 71.6 94 40.4
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 6.2e-11 71.2 135 39.3
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 6.2e-11 71.2 133 37.6
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 6.2e-11 71.2 125 40.0
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.1e-11 70.9 95 44.2
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.1e-10 70.5 102 45.1
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.4e-10 70.1 119 37.0
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.4e-10 70.1 93 48.4
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.4e-10 70.1 93 48.4
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.4e-10 70.1 94 42.6
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.8e-10 69.7 107 40.2
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.8e-10 69.7 107 40.2
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.4e-10 69.3 98 40.8
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.4e-10 69.3 129 39.5
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.1e-10 68.9 129 37.2
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 4.0e-10 68.6 120 35.8
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 6.9e-10 67.8 93 40.9
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 6.9e-10 67.8 93 40.9
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 6.9e-10 67.8 129 36.4
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 9.0e-10 67.4 128 35.2
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 9.0e-10 67.4 91 44.0
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-09 67.0 125 40.8
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-09 67.0 125 40.8
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 1.5e-09 66.6 89 42.7
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.5e-09 66.6 125 40.8
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.0e-09 66.2 119 32.8
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 3.4e-09 65.5 87 44.8
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 4.5e-09 65.1 90 38.9
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 5.8e-09 64.7 112 42.0
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 9.9e-09 63.9 96 41.7
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 9.9e-09 63.9 93 38.7
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.3e-08 63.5 88 46.6
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.7e-08 63.2 78 43.6
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.2e-08 62.8 93 43.0
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.9e-08 62.4 94 41.5
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.9e-08 62.4 92 38.0
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 6.4e-08 61.2 94 40.4
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.4e-08 60.8 93 37.6
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.2e-06 57.0 96 35.4
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.7e-06 55.8 84 34.5
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 4.6e-06 55.1 129 29.5
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.6e-06 55.1 105 37.1


User provided reference genes

Program Settings