Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005680g0020 Nicotiana tabacum HOM05D003654 ORTHO05D004176 8.1e-35 149.8 74 100.0
Nitab4.5_0000808g0050 Nicotiana tabacum HOM05D003654 ORTHO05D004176 7.8e-30 133.3 73 91.8
Peaxi162Scf00071g01115 Petunia axillaris HOM05D003654 ORTHO05D004176 1.5e-20 102.4 74 70.3
CAN.G1258.3 Capsicum annuum HOM05D003654 ORTHO05D004176 6.9e-18 93.6 75 68.0
Solyc08g044540.1 Solanum lycopersicum HOM05D003654 ORTHO05D004176 9.0e-18 93.2 75 68.0
Sopen08g013660 Solanum pennellii HOM05D003654 ORTHO05D004176 1.2e-17 92.8 74 68.9
Nitab4.5_0006340g0010 Nicotiana tabacum HOM05D003654 ORTHO05D004176 4.5e-09 64.3 91 42.9
Ciclev10006321m.g Citrus clementina HOM05D003654 ORTHO05D004176 1.3e-08 62.8 38 71.1
Thecc.05G154000 Theobroma cacao HOM05D003654 ORTHO05D004176 1.7e-08 62.4 81 42.0
Lsat_1_v5_gn_9_28901 Lactuca sativa HOM05D003654 ORTHO05D004176 2.9e-08 61.6 72 44.4
Carub.0005s2429 Capsella rubella HOM05D003654 ORTHO05D004176 4.9e-08 60.8 84 41.7
TAR633G1637 Trochodendron aralioides HOM05D003654 ORTHO05D004176 4.9e-08 60.8 84 38.1
BcaC02g09939 Brassica carinata HOM05D003654 ORTHO05D004176 6.5e-08 60.5 38 68.4
C04p34970 Brassica napus HOM05D003654 ORTHO05D004176 6.5e-08 60.5 38 68.4
BolC4t25052H Brassica oleracea HOM05D003654 ORTHO05D004176 6.5e-08 60.5 38 68.4
Atru.chr1.1086 Acer truncatum HOM05D003654 ORTHO05D004176 1.1e-07 59.7 82 39.0
Thhalv10006420m.g Eutrema salsugineum HOM05D003654 ORTHO05D004176 1.1e-07 59.7 38 68.4
Gorai.004G171000 Gossypium raimondii HOM05D003654 ORTHO05D004176 1.1e-07 59.7 75 42.7
Potri.001G263404 Populus trichocarpa HOM05D003654 ORTHO05D004176 1.1e-07 59.7 69 44.9
Atru.chr1.1087 Acer truncatum HOM05D003654 ORTHO05D004176 1.9e-07 58.9 82 36.6
Ciclev10033218m.g Citrus clementina HOM05D003654 ORTHO05D004176 3.2e-07 58.2 80 42.5
Gohir.D08G164000 Gossypium hirsutum HOM05D003654 ORTHO05D004176 3.2e-07 58.2 75 44.0
Lsat_1_v5_gn_9_28941 Lactuca sativa HOM05D003654 ORTHO05D004176 3.2e-07 58.2 74 43.2
Manes.10G139300 Manihot esculenta HOM05D003654 ORTHO05D004176 4.2e-07 57.8 40 65.0
Nitab4.5_0006340g0020 Nicotiana tabacum HOM05D003654 ORTHO05D004176 4.2e-07 57.8 48 54.2
Sc10g0000210 Simmondsia chinensis HOM05D003654 ORTHO05D004176 4.2e-07 57.8 38 63.2
THA.LOC109117091 Tarenaya hassleriana HOM05D003654 ORTHO05D004176 4.2e-07 57.8 42 59.5
Aqoxy7G00792 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 5.5e-07 57.4 69 39.1
Haze_19862 Corylus avellana HOM05D003654 ORTHO05D004176 5.5e-07 57.4 75 40.0
Gorai.006G136800 Gossypium raimondii HOM05D003654 ORTHO05D004176 5.5e-07 57.4 58 51.7
Atru.chr1.1088 Acer truncatum HOM05D003654 ORTHO05D004176 7.1e-07 57.0 35 68.6
Nitab4.5_0000707g0220 Nicotiana tabacum HOM05D003654 ORTHO05D004176 7.1e-07 57.0 48 52.1
SalBow5G4200 Salvia bowleyana HOM05D003654 ORTHO05D004176 7.1e-07 57.0 34 64.7
Gohir.A09G122400 Gossypium hirsutum HOM05D003654 ORTHO05D004176 9.3e-07 56.6 58 53.4
Gohir.D09G118500 Gossypium hirsutum HOM05D003654 ORTHO05D004176 9.3e-07 56.6 58 53.4
Lsat_1_v5_gn_9_28921 Lactuca sativa HOM05D003654 ORTHO05D004176 9.3e-07 56.6 74 41.9
Sabra16G0161800 Salix brachista HOM05D003654 ORTHO05D004176 9.3e-07 56.6 35 65.7
Solyc01g087580.3 Solanum lycopersicum HOM05D003654 ORTHO05D004176 9.3e-07 56.6 34 70.6
Sopen01g034550 Solanum pennellii HOM05D003654 ORTHO05D004176 9.3e-07 56.6 34 70.6
HanXRQChr03g0062221 Helianthus annuus HOM05D003654 ORTHO05D004176 1.2e-06 56.2 71 42.3
Lsat_1_v5_gn_9_28881 Lactuca sativa HOM05D003654 ORTHO05D004176 1.2e-06 56.2 72 40.3
PGSC0003DMG400006788 Solanum tuberosum HOM05D003654 ORTHO05D004176 1.2e-06 56.2 34 67.6
CARHR167650 Cardamine hirsuta HOM05D003654 ORTHO05D004176 1.6e-06 55.8 35 68.6
ClCG09G003960 Citrullus lanatus HOM05D003654 ORTHO05D004176 1.6e-06 55.8 39 59.0
Cc06_g17070 Coffea canephora HOM05D003654 ORTHO05D004176 1.6e-06 55.8 37 62.2
CsaV3_7G030860 Cucumis sativus L. HOM05D003654 ORTHO05D004176 1.6e-06 55.8 39 61.5
Hma1.2p1_2266F.1_g318450 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 1.6e-06 55.8 80 43.8
PGSC0003DMG400027273 Solanum tuberosum HOM05D003654 ORTHO05D004176 1.6e-06 55.8 41 58.5
Eucgr.H02820 Eucalyptus grandis HOM05D003654 ORTHO05D004176 2.1e-06 55.5 35 68.6
SEGI_17870 Sequoiadendron giganteum HOM05D003654 ORTHO05D004176 2.1e-06 55.5 49 55.1
Ah.10g038700 Amaranthus hybridus HOM05D003654 ORTHO05D004176 2.7e-06 55.1 71 40.8
BcaC07g40377 Brassica carinata HOM05D003654 ORTHO05D004176 2.7e-06 55.1 85 37.6
BcaC07g40378 Brassica carinata HOM05D003654 ORTHO05D004176 2.7e-06 55.1 38 63.2
BcaC07g40382 Brassica carinata HOM05D003654 ORTHO05D004176 2.7e-06 55.1 38 63.2
C08p32930 Brassica napus HOM05D003654 ORTHO05D004176 2.7e-06 55.1 38 63.2
BolC8t50897H Brassica oleracea HOM05D003654 ORTHO05D004176 2.7e-06 55.1 38 63.2
BraA09t40486Z Brassica rapa HOM05D003654 ORTHO05D004176 2.7e-06 55.1 38 63.2
Hma1.2p1_2266F.1_g318430 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 3.5e-06 54.7 35 65.7
MBI17_g05505_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 3.5e-06 54.7 72 34.7
MBI17_g39959_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 3.5e-06 54.7 72 34.7
PGSC0003DMG400006789 Solanum tuberosum HOM05D003654 ORTHO05D004176 3.5e-06 54.7 34 67.6
Zm00001eb301890 Zea mays HOM05D003654 ORTHO05D004176 3.5e-06 54.7 34 67.6
ClCG10G017020 Citrullus lanatus HOM05D003654 ORTHO05D004176 4.6e-06 54.3 37 59.5
Hma1.2p1_2266F.1_g318440 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 4.6e-06 54.3 71 43.7
Nn1g04367 Nelumbo nucifera HOM05D003654 ORTHO05D004176 4.6e-06 54.3 85 38.8
Nn2g15256 Nelumbo nucifera HOM05D003654 ORTHO05D004176 4.6e-06 54.3 44 59.1
Aqoxy7G00793 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 6.0e-06 53.9 75 44.0
Gohir.D11G328950 Gossypium hirsutum HOM05D003654 ORTHO05D004176 6.0e-06 53.9 64 46.9
Gorai.007G360300 Gossypium raimondii HOM05D003654 ORTHO05D004176 6.0e-06 53.9 64 46.9
Nn2g15259 Nelumbo nucifera HOM05D003654 ORTHO05D004176 6.0e-06 53.9 85 40.0
Peaxi162Scf00071g01140 Petunia axillaris HOM05D003654 ORTHO05D004176 6.0e-06 53.9 34 64.7
Sopen04g007780 Solanum pennellii HOM05D003654 ORTHO05D004176 6.0e-06 53.9 41 56.1
MELO3C009681.2 Cucumis melo HOM05D003654 ORTHO05D004176 7.9e-06 53.5 35 62.9
CsaV3_3G039380 Cucumis sativus L. HOM05D003654 ORTHO05D004176 7.9e-06 53.5 35 62.9
DCAR_020491 Daucus carota HOM05D003654 ORTHO05D004176 7.9e-06 53.5 34 64.7
HanXRQChr03g0062211 Helianthus annuus HOM05D003654 ORTHO05D004176 7.9e-06 53.5 40 55.0


User provided reference genes

Program Settings