Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.3e-172 609.0 344 100.0
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 7.1e-150 534.3 347 87.6
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 4.0e-129 465.3 356 74.4
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 1.2e-128 463.8 358 74.3
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.8e-121 439.9 353 72.0
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 2.9e-119 432.6 358 75.7
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 8.5e-111 404.4 372 70.4
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 5.9e-96 355.1 364 60.4
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 1.7e-95 353.6 366 60.7
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 7.0e-89 331.6 375 57.6
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 9.1e-89 331.3 374 60.2
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 4.5e-88 328.9 378 59.3
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.6e-85 320.5 377 57.8
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.7e-85 319.7 368 60.9
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 6.1e-85 318.5 377 60.2
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.4e-84 317.4 396 55.1
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 1.8e-84 317.0 375 58.7
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 3.0e-84 316.2 376 60.9
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 8.8e-84 314.7 387 55.8
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 4.1e-81 305.8 357 60.2
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.2e-80 304.3 372 56.5
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 8.5e-79 298.1 364 54.7
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 1.1e-78 297.7 371 57.7
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 4.2e-78 295.8 354 55.1
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 5.5e-78 295.4 377 58.4
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 1.2e-77 294.3 371 56.3
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.1e-77 293.5 370 53.5
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 3.6e-77 292.7 385 58.4
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 4.7e-77 292.4 377 53.6
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 6.1e-77 292.0 383 51.2
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 1.0e-76 291.2 364 56.6
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 2.3e-76 290.0 372 53.8
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 5.2e-76 288.9 365 57.8
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 8.8e-76 288.1 380 57.1
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.5e-75 287.3 357 57.1
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.0e-75 287.0 365 58.1
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 2.2e-74 283.5 374 52.7
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 6.3e-74 282.0 375 57.3
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 5.4e-73 278.9 382 53.4
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 7.0e-73 278.5 370 57.0
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 2.0e-72 276.9 382 51.3
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 2.0e-72 276.9 386 54.1
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.0e-72 276.9 365 54.5
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 2.7e-72 276.6 368 57.1
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 3.5e-72 276.2 365 51.8
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 5.9e-72 275.4 372 54.8
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.3e-71 273.5 456 47.1
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 2.3e-71 273.5 370 57.8
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 3.8e-71 272.7 377 55.2
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.5e-70 270.0 366 54.6
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.5e-70 270.0 355 57.2
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 4.3e-70 269.2 387 49.4
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 7.3e-70 268.5 373 57.6
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 7.3e-70 268.5 383 54.3
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 9.5e-70 268.1 362 51.7
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 1.2e-69 267.7 389 55.0
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 8.0e-69 265.0 374 54.5
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 2.3e-68 263.5 359 49.6
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 3.0e-68 263.1 355 51.3
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 8.9e-68 261.5 365 55.1
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.0e-67 260.4 380 54.2
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.6e-67 260.0 376 52.4
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 7.5e-67 258.5 365 55.3
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 1.7e-66 257.3 282 57.8
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 1.7e-66 257.3 371 51.5
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 3.7e-66 256.1 334 51.8
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 6.4e-66 255.4 373 53.1
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 2.4e-65 253.4 330 59.4
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.6e-64 250.8 347 57.9
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 2.0e-64 250.4 375 47.7
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.7e-64 250.0 357 54.9
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.7e-64 250.0 355 55.2
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.8e-64 248.4 358 55.0
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 1.0e-63 248.1 343 52.8
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 1.0e-63 248.1 357 52.9
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.7e-63 247.3 366 48.6
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 3.9e-63 246.1 374 47.6
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 3.9e-63 246.1 366 53.0
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.1e-62 244.6 366 47.5
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.1e-62 244.6 340 51.2
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.9e-62 243.8 349 53.3
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.3e-62 242.7 361 54.0
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.3e-62 241.9 367 47.7
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 9.5e-62 241.5 360 50.6
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 2.1e-61 240.4 351 52.7
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.8e-61 240.0 366 47.0
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 3.6e-61 239.6 364 50.5
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 6.2e-61 238.8 335 55.8
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.0e-60 238.0 317 54.9
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 5.2e-60 235.7 355 54.1
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.2e-59 234.6 351 51.3
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 3.4e-59 233.0 342 48.0
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.7e-58 230.7 365 53.4
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 2.9e-58 229.9 358 45.8
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.7e-58 229.6 432 41.0
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 1.1e-57 228.0 365 48.8
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 5.4e-57 225.7 289 56.7
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 7.0e-57 225.3 355 54.6
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.7e-56 223.4 435 40.5
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 7.8e-56 221.9 361 54.3
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 7.8e-56 221.9 360 49.2
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.3e-55 221.1 372 51.6
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 3.0e-55 219.9 250 56.8
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 3.9e-55 219.5 359 54.3
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 3.9e-55 219.5 357 45.9
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 6.6e-55 218.8 382 49.0
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 8.6e-55 218.4 370 45.9
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.5e-54 217.6 358 49.7
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.5e-54 217.6 317 46.4
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 5.6e-54 215.7 367 51.5
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 9.5e-54 214.9 366 44.0
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 2.1e-53 213.8 355 45.4
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 3.6e-53 213.0 360 53.9
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 6.2e-53 212.2 355 53.5
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.1e-52 209.9 438 39.3
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 5.2e-52 209.1 352 44.3
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.2e-51 208.0 358 42.2
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.5e-51 205.3 316 47.2
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 2.9e-50 203.4 329 48.6
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.4e-49 201.1 316 46.2
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 1.4e-49 201.1 337 47.8
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 7.8e-48 195.3 324 45.7
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 6.6e-47 192.2 319 43.9
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 1.1e-46 191.4 350 44.9
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 5.6e-46 189.1 314 46.8
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 5.6e-46 189.1 351 47.6
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 1.8e-44 184.1 357 44.8
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.0e-44 183.0 209 60.8
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 8.9e-44 181.8 367 43.9
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 2.6e-43 180.3 322 42.5
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 3.4e-43 179.9 350 41.1
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.3e-42 177.9 326 41.4
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 8.4e-42 175.3 364 40.7
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 1.4e-41 174.5 343 39.7
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.4e-41 174.5 296 45.3
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 4.1e-41 172.9 351 40.5
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 7.1e-41 172.2 335 44.8
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 1.6e-40 171.0 296 44.6
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 2.1e-40 170.6 185 61.6
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 1.3e-39 167.9 325 42.5
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.7e-39 167.5 362 39.8
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 3.9e-39 166.4 232 53.9
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 3.9e-39 166.4 291 45.0
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 1.4e-36 157.9 255 54.5
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 2.4e-36 157.1 382 34.8
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 6.8e-36 155.6 252 44.8
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.5e-35 154.5 367 34.6
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 1.5e-35 154.5 291 39.5
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 3.8e-34 149.8 248 43.5
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 4.9e-34 149.4 385 38.7
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 6.0e-32 142.5 370 35.9
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 7.8e-32 142.1 378 40.7
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 1.3e-31 141.4 326 34.7
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 2.4e-28 130.6 215 47.0
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 2.4e-28 130.6 363 35.8
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 6.9e-28 129.0 314 37.3
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 2.0e-27 127.5 210 46.2
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.0e-27 127.5 323 43.0
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.0e-27 127.5 323 43.0
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 9.3e-25 118.6 248 41.5
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 9.3e-25 118.6 248 41.5
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 1.2e-24 118.2 140 55.7
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.2e-24 118.2 217 46.1
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 6.0e-24 115.9 124 55.6
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 6.6e-23 112.5 249 39.8
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 6.6e-23 112.5 249 39.8
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.9e-22 110.9 305 31.5
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 8.1e-21 105.5 239 36.8
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.6e-19 100.5 350 37.1
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 5.8e-19 99.4 208 44.2
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 2.4e-17 94.0 332 31.9
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.9e-10 69.7 58 60.3
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.1e-09 68.6 58 58.6
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 1.1e-09 68.6 418 26.1
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.2e-09 67.0 124 37.1
Nn8g38913 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.1e-08 64.3 67 52.2
Pp3c2_17070 Physcomitrium patens HOM05D032375 ORTHO05D030105 6.0e-08 62.8 69 46.4
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 1.0e-07 62.0 358 26.3
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.8e-07 61.2 115 46.1
AagrBONN_evm.TU.Sc2ySwM_362.2718 Anthoceros agrestis HOM05D003676 ORTHO05D004262 5.1e-07 59.7 146 34.9
PSO700G0244 Papaver somniferum HOM05D065651 ORTHO05D004262 9.6e-06 55.5 253 31.2


User provided reference genes

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