Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005655g0060 Nicotiana tabacum HOM05D007178 ORTHO05D009022 5.0e-50 201.1 121 100.0
Nitab4.5_0000315g0010 Nicotiana tabacum HOM05D007178 ORTHO05D009022 5.4e-36 154.5 118 78.8
Solyc08g022120.3 Solanum lycopersicum HOM05D007178 ORTHO05D009022 1.0e-31 140.2 90 84.4
Sopen08g007660 Solanum pennellii HOM05D007178 ORTHO05D009022 1.0e-31 140.2 90 84.4
GSVIVG01021533001 Vitis vinifera HOM05D007178 ORTHO05D009022 9.5e-25 117.1 109 63.3
DCAR_027898 Daucus carota HOM05D007178 ORTHO05D009022 8.0e-24 114.0 75 77.3
Peaxi162Scf00045g02430 Petunia axillaris HOM05D007178 ORTHO05D009022 1.0e-23 113.6 112 65.2
ECA234G3634 Erigeron canadensis HOM05D007178 ORTHO05D009022 5.2e-23 111.3 80 72.5
Cc00_g05770 Coffea canephora HOM05D007178 ORTHO05D009022 1.2e-22 110.2 76 71.1
Prupe.4G084100 Prunus persica HOM05D007178 ORTHO05D009022 2.6e-22 109.0 70 74.3
Cpa.g.sc17.33 Carica papaya HOM05D007178 ORTHO05D009022 3.4e-22 108.6 81 69.1
TAR460G0007 Trochodendron aralioides HOM05D007178 ORTHO05D009022 7.5e-22 107.5 76 73.7
CSS0006510 Camellia sinensis var. sinensis HOM05D007178 ORTHO05D009022 9.8e-22 107.1 71 77.5
Dinv21533 Davidia involucrata HOM05D007178 ORTHO05D009022 1.3e-21 106.7 70 75.7
Duzib235G1408 Durio zibethinus HOM05D007178 ORTHO05D009022 1.3e-21 106.7 89 64.0
Lj2g0013550 Lotus japonicus HOM05D007178 ORTHO05D009022 4.9e-21 104.8 80 65.0
Atru.chr10.1132 Acer truncatum HOM05D007178 ORTHO05D009022 6.4e-21 104.4 70 71.4
FvH4_3g05190 Fragaria vesca HOM05D007178 ORTHO05D009022 8.3e-21 104.0 86 60.5
FAN16G3072 Fragaria x ananassa HOM05D007178 ORTHO05D009022 8.3e-21 104.0 86 60.5
FAN21G4020 Fragaria x ananassa HOM05D007178 ORTHO05D009022 8.3e-21 104.0 86 60.5
Lsat_1_v5_gn_4_29580 Lactuca sativa HOM05D007178 ORTHO05D009022 8.3e-21 104.0 70 74.3
QL05p055487 Quercus lobata HOM05D007178 ORTHO05D009022 8.3e-21 104.0 69 73.9
FAN25G1793 Fragaria x ananassa HOM05D007178 ORTHO05D009022 1.1e-20 103.6 86 60.5
Glyma.07G128900 Glycine max HOM05D007178 ORTHO05D009022 1.1e-20 103.6 83 66.3
Aqoxy4G00077 Aquilegia oxysepala HOM05D007178 ORTHO05D009022 1.4e-20 103.2 74 70.3
Cfa000915 Carpinus fangiana HOM05D007178 ORTHO05D009022 1.4e-20 103.2 70 72.9
Ciclev10017932m.g Citrus clementina HOM05D007178 ORTHO05D009022 1.4e-20 103.2 76 68.4
Duzib160G0207 Durio zibethinus HOM05D007178 ORTHO05D009022 1.4e-20 103.2 86 62.8
RcHm_v2.0_Chr5g0014561 Rosa chinensis HOM05D007178 ORTHO05D009022 1.4e-20 103.2 82 63.4
unitig_26.g9766 Utricularia gibba HOM05D007178 ORTHO05D009022 1.4e-20 103.2 86 65.1
CANSAT35G0370 Cannabis sativa HOM05D007178 ORTHO05D009022 1.9e-20 102.8 70 71.4
PSO541G3638 Papaver somniferum HOM05D007178 ORTHO05D009022 1.9e-20 102.8 81 66.7
CiPaw.09G121000 Carya illinoinensis HOM05D007178 ORTHO05D009022 2.4e-20 102.4 70 72.9
PSO675G4358 Papaver somniferum HOM05D007178 ORTHO05D009022 3.2e-20 102.1 79 69.6
Sc05g0006030 Simmondsia chinensis HOM05D007178 ORTHO05D009022 3.2e-20 102.1 91 62.6
Glyma.01G003100 Glycine max HOM05D007178 ORTHO05D009022 4.1e-20 101.7 83 63.9
MD05G1280800 Malus domestica HOM05D007178 ORTHO05D009022 4.1e-20 101.7 67 71.6
TWI73G0655 Tripterygium wilfordii HOM05D007178 ORTHO05D009022 4.1e-20 101.7 85 61.2
Migut.M00887 Erythranthe guttata HOM05D007178 ORTHO05D009022 5.4e-20 101.3 130 50.0
Manes.17G073200 Manihot esculenta HOM05D007178 ORTHO05D009022 5.4e-20 101.3 70 70.0
THA.LOC104798400 Tarenaya hassleriana HOM05D007178 ORTHO05D009022 7.0e-20 100.9 80 65.0
Thecc.06G146700 Theobroma cacao HOM05D007178 ORTHO05D009022 7.0e-20 100.9 70 70.0
MD10G1259200 Malus domestica HOM05D007178 ORTHO05D009022 9.2e-20 100.5 66 71.2
vmacro03352 Vaccinium macrocarpon HOM05D007178 ORTHO05D009022 9.2e-20 100.5 70 71.4
Gohir.A06G196500 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.2e-19 100.1 76 67.1
Gohir.D06G204000 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.2e-19 100.1 81 65.4
Sed0021444 Sechium edule HOM05D007178 ORTHO05D009022 1.2e-19 100.1 81 65.4
Dinv32223 Davidia involucrata HOM05D007178 ORTHO05D009022 1.6e-19 99.8 76 69.7
Gohir.A10G042700 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.6e-19 99.8 85 62.4
Gohir.D10G043700 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.6e-19 99.8 85 62.4
Gorai.011G046500 Gossypium raimondii HOM05D007178 ORTHO05D009022 1.6e-19 99.8 85 62.4
Ah.14g086320 Amaranthus hybridus HOM05D007178 ORTHO05D009022 2.0e-19 99.4 90 61.1
Phvul.004G171100 Phaseolus vulgaris HOM05D007178 ORTHO05D009022 2.0e-19 99.4 80 65.0
TWI09G0402 Tripterygium wilfordii HOM05D007178 ORTHO05D009022 2.0e-19 99.4 85 61.2
Psat1g049440 Pisum sativum HOM05D007178 ORTHO05D009022 3.5e-19 98.6 80 65.0
CiPaw.10G089700 Carya illinoinensis HOM05D007178 ORTHO05D009022 4.6e-19 98.2 70 67.1
Potri.004G133260 Populus trichocarpa HOM05D007178 ORTHO05D009022 4.6e-19 98.2 83 60.2
MELO3C007115.2 Cucumis melo HOM05D007178 ORTHO05D009022 6.0e-19 97.8 70 70.0
TPR.G35503 Trifolium pratense HOM05D007178 ORTHO05D009022 1.3e-18 96.7 80 63.8
CsaV3_6G051920 Cucumis sativus L. HOM05D007178 ORTHO05D009022 3.0e-18 95.5 70 68.6
Nn3g20425 Nelumbo nucifera HOM05D007178 ORTHO05D009022 3.0e-18 95.5 77 67.5
ClCG01G024800 Citrullus lanatus HOM05D007178 ORTHO05D009022 3.9e-18 95.1 81 60.5
Gorai.010G238000 Gossypium raimondii HOM05D007178 ORTHO05D009022 5.0e-18 94.7 70 68.6
PGR083G2020 Punica granatum HOM05D007178 ORTHO05D009022 5.0e-18 94.7 74 67.6
COL.COLO4_31031 Corchorus olitorius HOM05D007178 ORTHO05D009022 1.9e-17 92.8 65 70.8
MBI18_g11238_MAGBIO Magnolia biondii HOM05D007178 ORTHO05D009022 5.6e-17 91.3 76 63.2
arahy.Tifrunner.gnm1.ann1.KYL6KL Arachis hypogaea HOM05D007178 ORTHO05D009022 7.3e-17 90.9 70 65.7
Thhalv10026632m.g Eutrema salsugineum HOM05D007178 ORTHO05D009022 7.3e-17 90.9 82 61.0
CARHR225220 Cardamine hirsuta HOM05D007178 ORTHO05D009022 9.5e-17 90.5 82 61.0
AT4G18400 Arabidopsis thaliana HOM05D007178 ORTHO05D009022 1.6e-16 89.7 79 63.3
A01p10340 Brassica napus HOM05D007178 ORTHO05D009022 2.1e-16 89.4 77 62.3
BolC1t01205H Brassica oleracea HOM05D007178 ORTHO05D009022 2.1e-16 89.4 77 62.3
BcaNung00005 Brassica carinata HOM05D007178 ORTHO05D009022 2.8e-16 89.0 78 60.3
EL10Ac8g19636 Beta vulgaris HOM05D007178 ORTHO05D009022 3.6e-16 88.6 75 61.3
Lalb_Chr22g0349731 Lupinus albus HOM05D007178 ORTHO05D009022 3.6e-16 88.6 80 60.0
AL7G35950 Arabidopsis lyrata HOM05D007178 ORTHO05D009022 4.7e-16 88.2 79 63.3
BcaC06g30589 Brassica carinata HOM05D007178 ORTHO05D009022 4.7e-16 88.2 81 58.0
BraA01t00981Z Brassica rapa HOM05D007178 ORTHO05D009022 4.7e-16 88.2 77 62.3
Sp7g15630 Schrenkiella parvula HOM05D007178 ORTHO05D009022 4.7e-16 88.2 78 61.5
Hund17773 Selenicereus undatus HOM05D007178 ORTHO05D009022 4.7e-16 88.2 117 47.9
Lalb_Chr14g0375331 Lupinus albus HOM05D007178 ORTHO05D009022 6.2e-16 87.8 75 64.0
CDE11G0374 Ceratophyllum demersum HOM05D007178 ORTHO05D009022 1.1e-15 87.0 87 50.6
FAN11G0307 Fragaria x ananassa HOM05D007178 ORTHO05D009022 1.4e-15 86.7 62 64.5
Carub.0007s2286 Capsella rubella HOM05D007178 ORTHO05D009022 1.8e-15 86.3 79 60.8
A03p51260 Brassica napus HOM05D007178 ORTHO05D009022 2.3e-15 85.9 78 61.5
BraA03t14208Z Brassica rapa HOM05D007178 ORTHO05D009022 2.3e-15 85.9 78 61.5
HPP92_014792 Vanilla planifolia HOM05D007178 ORTHO05D009022 3.1e-15 85.5 67 62.7
BcaC09g51519 Brassica carinata HOM05D007178 ORTHO05D009022 6.8e-15 84.3 71 60.6
C01p12290 Brassica napus HOM05D007178 ORTHO05D009022 6.8e-15 84.3 71 60.6
CDE05G0627 Ceratophyllum demersum HOM05D007178 ORTHO05D009022 3.4e-14 82.0 90 50.0
SGA_v2.0_scaffold1G00199 Striga asiatica HOM05D007178 ORTHO05D009022 4.4e-14 81.6 64 64.1
Actinidia13672 Actinidia chinensis HOM05D007178 ORTHO05D009022 9.8e-14 80.5 55 70.9
vmacro05543 Vaccinium macrocarpon HOM05D007178 ORTHO05D009022 2.2e-13 79.3 80 55.0
VMungo0464G0906 Vigna mungo HOM05D007178 ORTHO05D009022 8.3e-13 77.4 53 69.8
FvH4_7g10051 Fragaria vesca HOM05D007178 ORTHO05D009022 1.1e-12 77.0 62 59.7
HanXRQChr07g0199391 Helianthus annuus HOM05D007178 ORTHO05D009022 1.4e-12 76.6 46 76.1
arahy.Tifrunner.gnm1.ann1.WWKL6Q Arachis hypogaea HOM05D007178 ORTHO05D009022 4.1e-12 75.1 42 78.6
Medtr8g006645 Medicago truncatula HOM05D007178 ORTHO05D009022 4.1e-12 75.1 62 61.3
Zm00001eb307790 Zea mays HOM05D007178 ORTHO05D009022 2.7e-11 72.4 73 53.4
Os09g0569450 Oryza sativa ssp. japonica HOM05D007178 ORTHO05D009022 3.5e-11 72.0 74 54.1
ATR1098G109 Amborella trichopoda HOM05D007178 ORTHO05D009022 6.0e-11 71.2 43 76.7
Aa31LG6G1110 Aethionema arabicum HOM05D007178 ORTHO05D009022 1.7e-10 69.7 66 59.1
FvH4_6g47640 Fragaria vesca HOM05D007178 ORTHO05D009022 6.6e-10 67.8 45 66.7
FvH4_3g19851 Fragaria vesca HOM05D007178 ORTHO05D009022 5.6e-09 64.7 40 70.0
Ah.13g071740 Amaranthus hybridus HOM05D007178 ORTHO05D009022 7.3e-09 64.3 49 67.3
FAN14G2280 Fragaria x ananassa HOM05D007178 ORTHO05D009022 7.3e-09 64.3 40 70.0
Actinidia33661 Actinidia chinensis HOM05D007178 ORTHO05D009022 1.8e-07 59.7 75 54.7
FAN12G1070 Fragaria x ananassa HOM05D007178 ORTHO05D009022 8.9e-07 57.4 44 61.4
SEGI_20805 Sequoiadendron giganteum HOM05D019012 ORTHO05D020434 8.9e-07 57.4 45 57.8
Gohir.D07G160820 Gossypium hirsutum HOM05D007178 ORTHO05D009022 2.0e-06 56.2 32 75.0


User provided reference genes

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