Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.2e-147 525.0 253 100.0
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.7e-122 442.2 253 87.0
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 7.3e-120 434.1 254 83.9
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 9.9e-117 423.7 243 83.5
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 4.1e-86 322.0 224 68.3
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 6.9e-86 321.2 241 64.3
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 3.2e-83 312.4 243 62.6
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.7e-82 309.3 239 62.8
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.4e-81 307.0 249 59.8
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.8e-81 306.6 241 61.8
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 3.3e-80 302.4 237 61.6
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 9.7e-80 300.8 243 60.1
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 6.9e-78 294.7 241 59.8
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 9.1e-78 294.3 255 58.0
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 9.1e-78 294.3 240 59.2
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 1.2e-77 293.9 220 64.1
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 1.2e-77 293.9 238 59.7
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.4e-77 292.4 240 59.2
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.4e-77 292.4 240 58.8
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.5e-77 292.0 240 59.2
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.9e-77 291.6 240 59.2
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.7e-76 290.0 248 57.3
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 3.8e-76 288.9 226 60.6
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 6.5e-76 288.1 248 55.2
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.4e-75 287.0 240 58.3
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 3.2e-75 285.8 210 64.8
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 4.2e-75 285.4 227 62.1
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 5.5e-75 285.0 236 58.9
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 1.6e-74 283.5 227 59.5
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.6e-74 283.5 242 57.9
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 1.8e-73 280.0 235 57.4
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 3.9e-73 278.9 222 61.7
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 8.8e-73 277.7 228 59.6
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.0e-72 276.6 228 59.6
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.6e-72 276.2 219 60.3
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.6e-72 276.2 240 57.9
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 4.4e-72 275.4 240 55.8
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 5.7e-72 275.0 240 55.4
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 7.4e-72 274.6 161 80.7
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 9.7e-72 274.2 236 56.4
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.3e-71 273.9 242 57.9
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.3e-71 273.9 248 54.8
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 6.3e-71 271.6 240 55.8
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.4e-70 270.4 223 58.7
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 2.4e-70 269.6 241 57.3
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 5.3e-70 268.5 222 57.2
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 5.3e-70 268.5 240 55.0
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 9.1e-70 267.7 222 57.2
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.6e-69 266.2 154 81.2
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 3.5e-69 265.8 240 55.4
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 3.8e-68 262.3 242 53.7
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 5.0e-68 261.9 218 58.3
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 8.5e-68 261.2 241 52.3
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.9e-67 260.0 213 57.3
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.9e-67 260.0 241 51.9
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 4.2e-67 258.8 240 52.9
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.2e-66 257.3 248 52.0
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.6e-66 256.9 240 52.5
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.7e-66 256.1 241 51.0
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 3.6e-66 255.8 238 52.9
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.4e-65 253.8 237 51.5
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 3.0e-65 252.7 235 50.6
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 8.8e-65 251.1 219 53.4
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 3.3e-64 249.2 249 51.4
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 5.7e-64 248.4 249 51.4
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.3e-63 245.0 238 50.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 7.0e-62 241.5 245 51.4
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.2e-61 240.7 247 47.4
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 4.5e-61 238.8 250 49.2
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 1.5e-59 233.8 239 49.8
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 1.5e-59 233.8 239 49.4
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.6e-56 223.0 237 47.7
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 4.4e-56 222.2 238 45.0
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 5.7e-56 221.9 205 55.6
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.8e-54 216.9 184 61.4
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 5.9e-53 211.8 252 45.2
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 1.0e-52 211.1 161 60.2
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.6e-50 203.8 229 46.7
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.1e-50 203.4 226 46.9
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 3.6e-50 202.6 221 45.7
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 8.0e-50 201.4 235 45.1
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 3.4e-48 196.1 214 48.6
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.3e-44 184.1 240 39.6
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.3e-43 179.5 196 46.4
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 8.0e-42 174.9 182 50.5
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.3e-31 141.0 96 68.8
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 2.3e-28 130.2 169 40.2
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 7.1e-22 108.6 78 57.7
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 4.0e-17 92.8 98 42.9
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 3.2e-14 83.2 171 32.2


User provided reference genes

Program Settings