Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005637g0050 Nicotiana tabacum HOM05D011380 ORTHO05D016005 4.3e-118 427.9 205 100.0
Nitab4.5_0000651g0220 Nicotiana tabacum HOM05D011380 ORTHO05D016005 6.3e-29 131.7 86 75.6
Solyc00g020030.1 Solanum lycopersicum HOM05D011380 ORTHO05D016005 1.2e-24 117.5 68 86.8
Peaxi162Scf00673g00229 Petunia axillaris HOM05D011380 ORTHO05D016005 8.0e-24 114.8 68 85.3
Gorai.001G165500 Gossypium raimondii HOM05D011380 ORTHO05D016005 4.0e-23 112.5 66 84.8
Nitab4.5_0001761g0030 Nicotiana tabacum HOM05D008931 ORTHO05D010933 7.7e-19 98.2 49 91.8
Nitab4.5_0012234g0070 Nicotiana tabacum HOM05D008931 ORTHO05D010933 1.7e-18 97.1 49 91.8
Nitab4.5_0002739g0190 Nicotiana tabacum HOM05D016282 ORTHO05D012397 2.5e-17 93.2 73 67.1
ECA039G0008 Erigeron canadensis HOM05D016282 ORTHO05D022521 7.2e-17 91.7 49 87.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-16 90.1 48 85.4
Nitab4.5_0002452g0040 Nicotiana tabacum HOM05D011380 ORTHO05D016005 3.0e-15 86.3 48 85.4
arahy.Tifrunner.gnm1.ann1.8WK9L8 Arachis hypogaea HOM05D020811 ORTHO05D018485 7.5e-14 81.6 52 76.9
Nitab4.5_0009709g0080 Nicotiana tabacum HOM05D008609 ORTHO05D010987 1.8e-12 77.0 182 40.1
SabraMtG0006000 Salix brachista HOM05D012647 ORTHO05D014727 4.1e-12 75.9 46 82.6
Solyc11g044640.1 Solanum lycopersicum HOM05D008931 ORTHO05D018485 7.0e-12 75.1 41 80.5
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.0e-11 73.6 33 97.0
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 4.5e-11 72.4 31 100.0
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 6.6e-10 68.6 31 96.8
EL10Ac6g13786 Beta vulgaris HOM05D011380 ORTHO05D016005 3.6e-08 62.8 37 78.4
Nitab4.5_0017570g0010 Nicotiana tabacum HOM05D008931 ORTHO05D018485 4.7e-08 62.4 34 85.3
TPR.G384 Trifolium pratense HOM05D010190 ORTHO05D010933 3.0e-07 59.7 36 72.2
arahy.Tifrunner.gnm1.ann1.4PHN98 Arachis hypogaea HOM05D020811 ORTHO05D018485 4.0e-07 59.3 33 84.8
Actinidia34941 Actinidia chinensis HOM05D008490 ORTHO05D010725 2.0e-06 57.0 37 70.3
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 2.0e-06 57.0 47 61.7
Nitab4.5_0000886g0230 Nicotiana tabacum HOM05D008609 ORTHO05D012397 4.4e-06 55.8 52 57.7


User provided reference genes

Program Settings