Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.0e-148 529.3 296 100.0
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 5.7e-140 501.1 295 95.3
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 9.4e-135 483.8 298 91.6
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.2e-110 403.7 308 70.1
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 8.1e-110 401.0 299 75.9
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.8e-108 394.8 294 69.0
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 9.8e-108 394.0 294 67.7
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.2e-107 392.9 297 68.0
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.9e-107 392.5 296 68.9
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.9e-107 392.5 294 69.4
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.4e-106 390.2 296 67.9
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.4e-106 390.2 296 67.2
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 9.2e-106 387.5 296 68.2
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.3e-104 382.9 306 68.0
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.5e-103 380.2 304 64.8
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 7.3e-103 377.9 297 69.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 7.3e-103 377.9 304 64.5
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.3e-103 377.9 304 64.5
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.3e-103 377.9 304 64.5
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 7.3e-103 377.9 310 65.5
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.6e-102 375.6 297 66.7
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 6.2e-102 374.8 253 75.5
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 8.1e-102 374.4 294 66.3
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.8e-101 373.2 296 64.5
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 2.3e-101 372.9 299 64.2
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 5.2e-101 371.7 296 66.9
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 5.2e-101 371.7 306 64.7
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 6.8e-101 371.3 300 64.0
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 6.8e-101 371.3 295 66.1
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.0e-100 369.8 300 63.7
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 7.6e-100 367.9 307 62.9
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 9.9e-100 367.5 296 65.9
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 9.9e-100 367.5 304 67.8
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 9.9e-100 367.5 337 58.5
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 1.3e-99 367.1 296 61.5
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 1.3e-99 367.1 296 61.5
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 3.8e-99 365.5 307 63.8
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.9e-99 365.2 296 63.2
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 8.4e-99 364.4 295 63.1
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.1e-98 362.1 296 64.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 7.1e-98 361.3 299 63.2
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 9.2e-98 360.9 296 62.5
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 9.2e-98 360.9 294 60.9
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 6.0e-97 358.2 296 63.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.3e-96 357.1 296 64.5
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 3.3e-95 352.4 294 59.9
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 5.6e-95 351.7 295 58.3
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 7.3e-95 351.3 301 67.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 9.6e-95 350.9 310 61.6
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.2e-94 350.5 299 58.9
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 2.1e-94 349.7 311 64.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 2.1e-94 349.7 295 60.3
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 4.7e-94 348.6 301 61.5
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 2.4e-93 346.3 313 58.1
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.2e-92 344.0 307 61.2
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.5e-92 343.6 316 58.5
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.5e-92 343.6 316 58.5
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.6e-92 342.8 316 58.5
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 2.6e-92 342.8 316 58.9
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 3.4e-92 342.4 316 58.2
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 3.4e-92 342.4 316 58.2
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 4.4e-92 342.0 316 58.5
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 7.6e-92 341.3 296 63.2
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 9.9e-92 340.9 318 59.4
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 9.9e-92 340.9 298 59.7
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.3e-91 340.5 298 60.1
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 4.9e-91 338.6 316 58.5
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.4e-90 337.0 296 61.8
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 2.4e-90 336.3 296 59.1
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 5.4e-90 335.1 317 59.0
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 5.4e-90 335.1 317 58.7
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 7.1e-90 334.7 298 63.1
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.0e-88 329.3 308 58.8
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.9e-87 326.6 304 60.9
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 5.6e-87 325.1 304 56.9
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 1.3e-86 323.9 301 58.8
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.6e-86 322.4 315 55.9
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 4.8e-86 322.0 312 55.4
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.4e-85 319.7 300 54.7
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.6e-84 316.2 304 64.1
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 2.2e-83 313.2 299 54.8
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.9e-83 312.0 298 61.1
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.4e-82 310.5 298 59.1
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.9e-82 310.1 300 60.3
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.9e-82 310.1 265 61.1
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 9.3e-82 307.8 308 55.8
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 2.7e-81 306.2 264 58.0
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 1.0e-80 304.3 285 56.8
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 4.3e-79 298.9 293 59.0
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.3e-79 298.9 259 60.6
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.3e-78 297.4 257 58.0
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.1e-78 296.6 205 73.7
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.4e-77 293.9 298 57.7
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 5.5e-74 282.0 304 54.6
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 7.1e-74 281.6 296 57.8
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.6e-73 280.4 266 57.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.6e-73 280.4 309 53.1
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 3.3e-71 272.7 203 68.0
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.5e-68 263.8 297 53.5
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 6.5e-67 258.5 309 46.9
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 3.7e-62 242.7 242 57.4
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 1.5e-60 237.3 188 77.7
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 4.5e-60 235.7 208 71.6
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 8.5e-59 231.5 226 51.8
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.3e-56 223.4 301 46.5
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.8e-48 197.2 262 46.2
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 3.9e-48 196.1 271 42.1
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.7e-46 189.5 134 71.6
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 1.4e-45 187.6 263 43.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.4e-45 186.8 295 40.3
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.1e-45 186.4 272 45.2
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.3e-38 164.5 264 40.2
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.2e-38 163.7 264 39.4
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.4e-37 161.0 298 38.6
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.0e-35 152.5 117 67.5
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 2.5e-34 150.2 183 47.0
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.2e-33 147.9 111 68.5
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 2.1e-33 147.1 124 62.9
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.0e-32 143.3 132 58.3
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 7.5e-31 138.7 177 46.9
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.7e-30 136.3 177 46.3
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.2e-26 122.9 304 32.2
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 4.2e-26 122.9 96 60.4
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 8.0e-25 118.6 117 55.6
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 8.8e-24 115.2 157 43.9
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 4.8e-22 109.4 150 40.7
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 9.1e-21 105.1 125 52.8
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 5.0e-19 99.4 88 55.7
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.5e-18 95.1 67 59.7
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 2.3e-16 90.5 96 69.8
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.2e-09 68.2 95 47.4
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 1.2e-07 61.6 65 52.3
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 4.9e-06 56.2 66 68.2


User provided reference genes

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