Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005621g0150 Nicotiana tabacum HOM05D004609 ORTHO05D005537 5.5e-62 240.7 117 100.0
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 7.4e-59 230.3 117 94.0
Nitab4.5_0000650g0230 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.8e-58 228.4 117 92.3
Peaxi162Scf00270g00828 Petunia axillaris HOM05D004609 ORTHO05D005537 7.0e-57 223.8 117 90.6
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 1.2e-56 223.0 117 91.5
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 4.5e-56 221.1 117 91.5
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 4.5e-56 221.1 117 91.5
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 5.0e-55 217.6 117 89.7
Nitab4.5_0004205g0030 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.1e-54 216.5 117 89.7
Dinv32752 Davidia involucrata HOM05D004609 ORTHO05D005537 5.5e-54 214.2 117 85.5
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 5.5e-54 214.2 117 85.5
Lj1A191G19 Lonicera japonica HOM05D004609 ORTHO05D005537 5.5e-54 214.2 117 83.8
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 7.2e-54 213.8 117 85.5
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 6.1e-53 210.7 117 85.5
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 2.3e-52 208.8 117 82.9
TWI79G0533 Tripterygium wilfordii HOM05D004609 ORTHO05D005537 6.7e-52 207.2 117 83.8
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 1.5e-51 206.1 117 82.9
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 1.5e-51 206.1 117 82.9
Actinidia07134 Actinidia chinensis HOM05D004609 ORTHO05D005537 2.0e-51 205.7 117 82.9
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 2.0e-51 205.7 117 80.3
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 2.0e-51 205.7 117 82.9
Cc01_g11180 Coffea canephora HOM05D004609 ORTHO05D005537 2.6e-51 205.3 117 79.5
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 2.6e-51 205.3 117 83.8
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 5.7e-51 204.1 117 81.2
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 5.7e-51 204.1 117 82.1
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla HOM05D004609 ORTHO05D005537 5.7e-51 204.1 117 79.5
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 5.7e-51 204.1 117 81.2
Nitab4.5_0012973g0010 Nicotiana tabacum HOM05D004609 ORTHO05D005537 7.5e-51 203.8 117 80.3
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 1.3e-50 203.0 117 80.3
QL03p063529 Quercus lobata HOM05D004609 ORTHO05D005537 1.3e-50 203.0 117 82.9
QL03p063925 Quercus lobata HOM05D004609 ORTHO05D005537 1.3e-50 203.0 117 82.9
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 1.7e-50 202.6 117 79.5
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 2.2e-50 202.2 117 78.6
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.2e-50 202.2 117 84.6
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 2.8e-50 201.8 117 80.3
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 3.7e-50 201.4 117 82.1
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 3.7e-50 201.4 117 81.2
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 4.8e-50 201.1 117 81.2
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 4.8e-50 201.1 117 81.2
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 6.3e-50 200.7 117 80.3
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 8.2e-50 200.3 117 81.2
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 8.2e-50 200.3 117 82.1
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 8.2e-50 200.3 117 81.2
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 1.1e-49 199.9 116 79.3
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.1e-49 199.9 117 80.3
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 1.4e-49 199.5 117 80.3
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 1.4e-49 199.5 117 80.3
CSS0023307 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.8e-49 199.1 117 80.3
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 2.4e-49 198.7 117 79.5
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 3.1e-49 198.4 117 80.3
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 3.1e-49 198.4 117 79.5
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 4.1e-49 198.0 117 80.3
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 5.3e-49 197.6 117 79.5
GSVIVG01025180001 Vitis vinifera HOM05D004609 ORTHO05D005537 5.3e-49 197.6 117 79.5
CSS0022919 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 7.0e-49 197.2 117 79.5
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 7.0e-49 197.2 117 77.8
Nn2g13092 Nelumbo nucifera HOM05D004609 ORTHO05D005537 7.0e-49 197.2 117 82.9
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 9.1e-49 196.8 117 76.1
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 1.2e-48 196.4 117 78.6
Potri.009G025500 Populus trichocarpa HOM05D004609 ORTHO05D005537 1.2e-48 196.4 117 76.9
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 1.6e-48 196.1 117 78.6
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 2.0e-48 195.7 117 77.8
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 2.7e-48 195.3 117 77.8
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 3.5e-48 194.9 117 79.5
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 4.5e-48 194.5 117 78.6
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 4.5e-48 194.5 117 78.6
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 4.5e-48 194.5 117 82.1
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 5.9e-48 194.1 117 77.8
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 5.9e-48 194.1 117 77.8
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 7.7e-48 193.7 117 76.9
Glyma.11G147000 Glycine max HOM05D004609 ORTHO05D005537 7.7e-48 193.7 117 75.2
Aa31LG1G12570 Aethionema arabicum HOM05D004609 ORTHO05D005537 1.0e-47 193.4 117 75.2
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 1.0e-47 193.4 117 76.1
SGA_v2.0_scaffold80G25763 Striga asiatica HOM05D004609 ORTHO05D005537 1.0e-47 193.4 117 75.2
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea HOM05D004609 ORTHO05D005537 2.2e-47 192.2 117 76.9
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 3.8e-47 191.4 117 79.5
AL8G37180 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 6.5e-47 190.7 117 74.4
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 6.5e-47 190.7 117 76.1
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 6.5e-47 190.7 117 79.5
Sc03g0007720 Simmondsia chinensis HOM05D004609 ORTHO05D005537 6.5e-47 190.7 117 76.9
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 6.5e-47 190.7 117 74.4
Thhalv10014329m.g Eutrema salsugineum HOM05D004609 ORTHO05D005537 8.5e-47 190.3 117 72.6
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 8.5e-47 190.3 117 74.4
SalBow6G5279 Salvia bowleyana HOM05D004609 ORTHO05D005537 8.5e-47 190.3 117 76.1
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 8.5e-47 190.3 117 76.9
BraA10t43855Z Brassica rapa HOM05D004609 ORTHO05D005537 1.1e-46 189.9 117 72.6
CARHR274250 Cardamine hirsuta HOM05D004609 ORTHO05D005537 1.1e-46 189.9 117 72.6
Cpa.g.sc216.14 Carica papaya HOM05D004609 ORTHO05D005537 1.1e-46 189.9 117 75.2
Sp6g22160 Schrenkiella parvula HOM05D004609 ORTHO05D005537 1.1e-46 189.9 117 72.6
ClCG03G002070 Citrullus lanatus HOM05D004609 ORTHO05D005537 1.5e-46 189.5 117 74.4
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 1.5e-46 189.5 117 75.2
Sabra09G0016900 Salix brachista HOM05D004609 ORTHO05D005537 1.9e-46 189.1 117 75.2
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 3.2e-46 188.3 117 71.8
C09p53290 Brassica napus HOM05D004609 ORTHO05D005537 3.2e-46 188.3 117 71.8
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 3.2e-46 188.3 117 76.9
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 3.2e-46 188.3 117 76.9
Carub.0008s2127 Capsella rubella HOM05D004609 ORTHO05D005537 4.2e-46 188.0 117 72.6
BolC9t58203H Brassica oleracea HOM05D004609 ORTHO05D005537 9.4e-46 186.8 117 70.9
A10p17780 Brassica napus HOM05D004609 ORTHO05D005537 1.2e-45 186.4 117 71.8
SalBow3G2420 Salvia bowleyana HOM05D004609 ORTHO05D005537 1.2e-45 186.4 131 69.5
THA.LOC104799500 Tarenaya hassleriana HOM05D004609 ORTHO05D005537 1.2e-45 186.4 117 70.9
BcaB08g36354 Brassica carinata HOM05D004609 ORTHO05D005537 1.6e-45 186.0 117 70.9
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 1.6e-45 186.0 117 76.1
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 1.6e-45 186.0 117 74.4
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 2.1e-45 185.7 117 71.8
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 2.7e-45 185.3 117 75.2
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 2.7e-45 185.3 117 76.9
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 2.7e-45 185.3 117 70.9
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 4.7e-45 184.5 117 75.2
Hund10347 Selenicereus undatus HOM05D004609 ORTHO05D005537 6.1e-45 184.1 117 74.4
Zm00001eb007760 Zea mays HOM05D004609 ORTHO05D005537 6.1e-45 184.1 117 72.6
AUR62001379 Chenopodium quinoa HOM05D004609 ORTHO05D005537 8.0e-45 183.7 117 74.4
Nitab4.5_0006639g0020 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.0e-44 183.3 117 79.5
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 1.0e-44 183.3 117 70.9
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 1.4e-44 183.0 117 73.5
Hund02313 Selenicereus undatus HOM05D004609 ORTHO05D005537 3.0e-44 181.8 117 75.2
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 4.0e-44 181.4 117 75.2
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 1.2e-43 179.9 117 70.1
CDE09G0954 Ceratophyllum demersum HOM05D004609 ORTHO05D005537 2.6e-43 178.7 117 70.9
Nitab4.5_0005621g0170 Nicotiana tabacum HOM05D004609 ORTHO05D005537 5.7e-43 177.6 96 87.5
AUR62009522 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.2e-42 175.6 113 74.3
AUR62025599 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.2e-42 175.6 113 74.3
CAN.G604.3 Capsicum annuum HOM05D004609 ORTHO05D005537 1.2e-40 169.9 97 89.7
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 6.6e-39 164.1 117 64.1
Nitab4.5_0006639g0060 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.6e-37 159.5 96 83.3
CAN.G1153.4 Capsicum annuum HOM05D004609 ORTHO05D005537 2.8e-37 158.7 97 81.4
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 4.0e-36 154.8 117 59.8
Nitab4.5_0006639g0090 Nicotiana tabacum HOM05D004609 ORTHO05D005537 7.5e-35 150.6 93 80.6
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 3.1e-33 145.2 117 60.7
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 2.7e-32 142.1 117 61.5
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 7.8e-32 140.6 117 53.8
CSS0027878 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 2.9e-31 138.7 117 60.7
BcaB01g04662 Brassica carinata HOM05D004609 ORTHO05D005537 6.6e-31 137.5 91 68.1
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 4.3e-30 134.8 117 53.0
vmacro03196 Vaccinium macrocarpon HOM05D004609 ORTHO05D005537 7.3e-30 134.0 80 80.0
A03p11090 Brassica napus HOM05D004609 ORTHO05D005537 2.1e-29 132.5 90 64.4
BraA03t10423Z Brassica rapa HOM05D004609 ORTHO05D005537 2.1e-29 132.5 90 64.4
CBR_g359 Chara braunii HOM05D004609 ORTHO05D005537 1.1e-25 120.2 122 50.8
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 3.2e-25 118.6 122 49.2
MCO01G111 Micromonas commoda HOM05D004609 ORTHO05D005537 4.1e-25 118.2 117 47.0
CSS0039805 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.6e-24 116.3 117 51.3
AUR62013942 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.0e-19 99.4 70 70.0
AL4G25930 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 9.8e-19 97.1 117 46.2
PRCOL_00000940 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 1.4e-17 93.2 101 48.5
Haze_26358 Corylus avellana HOM05D004609 ORTHO05D005537 1.9e-17 92.8 115 40.0
AUR62017074 Chenopodium quinoa HOM05D004609 ORTHO05D005537 3.4e-11 72.0 104 42.3


User provided reference genes

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