Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005621g0060 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.7e-58 228.4 110 100.0
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 3.4e-45 184.9 100 90.0
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 4.4e-45 184.5 100 89.0
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 3.2e-43 178.3 102 87.3
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 8.6e-41 170.2 98 81.6
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 5.6e-40 167.5 98 80.6
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 9.5e-40 166.8 98 80.6
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 1.2e-37 159.8 98 74.5
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 1.6e-34 149.4 98 72.4
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 3.5e-34 148.3 100 71.0
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 1.3e-33 146.4 98 72.4
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 9.5e-32 140.2 101 69.3
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 1.4e-30 136.3 101 66.3
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 1.8e-30 136.0 100 68.0
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.3e-30 135.6 100 68.0
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 1.2e-29 133.3 98 63.3
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 1.5e-29 132.9 100 64.0
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 5.8e-29 131.0 100 61.0
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 1.3e-28 129.8 98 64.3
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 8.3e-28 127.1 100 60.0
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 1.1e-27 126.7 100 57.0
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 1.1e-27 126.7 106 58.5
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 1.4e-27 126.3 100 64.0
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 2.4e-27 125.6 100 58.0
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 2.4e-27 125.6 100 58.0
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 4.1e-27 124.8 100 59.0
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 4.1e-27 124.8 100 59.0
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 9.2e-27 123.6 100 59.0
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 2.7e-26 122.1 103 60.2
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 3.5e-26 121.7 95 58.9
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.5e-26 121.7 100 57.0
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 6.0e-26 120.9 100 60.0
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 6.0e-26 120.9 103 62.1
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 7.8e-26 120.6 106 56.6
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 7.8e-26 120.6 100 57.0
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 7.8e-26 120.6 100 57.0
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 7.8e-26 120.6 101 58.4
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 1.0e-25 120.2 105 59.0
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 2.3e-25 119.0 100 57.0
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 2.3e-25 119.0 95 55.8
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 3.0e-25 118.6 100 55.0
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 3.0e-25 118.6 98 54.1
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 5.1e-25 117.9 101 56.4
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 5.1e-25 117.9 99 55.6
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 5.1e-25 117.9 100 57.0
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 5.1e-25 117.9 100 54.0
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 6.6e-25 117.5 100 56.0
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 8.6e-25 117.1 100 56.0
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 8.6e-25 117.1 100 58.0
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 8.6e-25 117.1 105 57.1
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 1.1e-24 116.7 101 56.4
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 1.9e-24 115.9 101 55.4
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 1.9e-24 115.9 99 55.6
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 2.5e-24 115.5 99 54.5
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 4.3e-24 114.8 101 54.5
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 7.3e-24 114.0 99 54.5
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 7.3e-24 114.0 108 54.6
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 9.5e-24 113.6 100 54.0
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 9.5e-24 113.6 100 54.0
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 9.5e-24 113.6 104 56.7
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 9.5e-24 113.6 105 58.1
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 1.2e-23 113.2 99 54.5
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 1.6e-23 112.8 98 57.1
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 1.6e-23 112.8 100 57.0
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 2.1e-23 112.5 101 57.4
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 2.1e-23 112.5 101 55.4
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 2.1e-23 112.5 97 51.5
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 2.1e-23 112.5 109 53.2
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 3.6e-23 111.7 101 52.5
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 8.1e-23 110.5 96 52.1
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 1.4e-22 109.8 95 53.7
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 1.4e-22 109.8 97 53.6
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 2.4e-22 109.0 105 54.3
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 4.0e-22 108.2 100 49.0
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 6.8e-22 107.5 106 50.0
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 6.8e-22 107.5 100 52.0
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 6.8e-22 107.5 97 52.6
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 6.8e-22 107.5 100 53.0
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 6.8e-22 107.5 98 58.2
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 6.8e-22 107.5 100 52.0
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 8.9e-22 107.1 103 49.5
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 8.9e-22 107.1 103 49.5
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 1.2e-21 106.7 103 49.5
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 1.2e-21 106.7 97 54.6
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 1.5e-21 106.3 97 57.7
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 1.5e-21 106.3 102 50.0
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 2.0e-21 105.9 100 50.0
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 2.6e-21 105.5 103 49.5
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 2.6e-21 105.5 102 49.0
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 2.6e-21 105.5 96 54.2
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 3.4e-21 105.1 102 48.0
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 3.4e-21 105.1 102 48.0
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 3.4e-21 105.1 102 48.0
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 3.4e-21 105.1 105 50.5
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 4.4e-21 104.8 100 53.0
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 5.8e-21 104.4 95 57.9
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 7.6e-21 104.0 103 47.6
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 7.6e-21 104.0 102 48.0
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 9.9e-21 103.6 102 47.1
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 1.3e-20 103.2 104 47.1
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 1.3e-20 103.2 105 49.5
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 1.7e-20 102.8 102 52.9
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 1.7e-20 102.8 102 52.0
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 4.9e-20 101.3 106 48.1
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 8.4e-20 100.5 100 47.0
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 1.4e-19 99.8 97 47.4
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 1.4e-19 99.8 110 47.3
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 2.4e-19 99.0 94 52.1
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 3.2e-19 98.6 100 50.0
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 1.6e-18 96.3 99 45.5
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 3.5e-18 95.1 95 51.6
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 4.6e-18 94.7 99 50.5
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 6.0e-18 94.4 96 49.0
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 1.0e-17 93.6 102 43.1
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 1.0e-17 93.6 95 47.4
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 1.3e-17 93.2 95 48.4
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 8.7e-17 90.5 99 50.5
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 1.5e-16 89.7 99 45.5
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 1.9e-16 89.4 111 48.6
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 1.9e-16 89.4 111 48.6
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 1.9e-16 89.4 111 48.6
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 3.6e-15 85.1 85 52.9
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.8e-14 82.8 91 44.0
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 4.4e-13 78.2 104 40.4
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 4.4e-13 78.2 104 40.4
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 2.2e-12 75.9 104 38.5
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 2.4e-11 72.4 194 28.9
EL10As7g23765 Beta vulgaris HOM05D005090 ORTHO05D006142 3.2e-11 72.0 94 45.7
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 3.5e-10 68.6 83 41.0
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 4.6e-10 68.2 108 36.1
SMO140G0004 Selaginella moellendorffii HOM05D002426 ORTHO05D002873 6.6e-09 64.3 125 32.8
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 5.6e-08 61.2 95 35.8


User provided reference genes

Program Settings