Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 4.1e-143 511.5 286 100.0
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.2e-104 382.9 275 82.9
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.3e-93 346.3 256 81.2
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 5.8e-89 331.6 332 66.6
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.3e-88 330.5 332 65.4
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.2e-86 323.9 332 64.2
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 4.4e-81 305.4 358 55.3
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 1.1e-68 264.2 331 57.7
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 1.1e-68 264.2 331 57.7
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 9.0e-66 254.6 331 56.2
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 1.3e-61 240.7 328 48.2
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 9.6e-60 234.6 333 51.4
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 4.8e-59 232.3 333 51.4
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 1.1e-58 231.1 329 48.6
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 1.1e-58 231.1 323 53.6
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.4e-58 229.9 333 48.3
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 4.1e-58 229.2 340 47.6
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 9.0e-58 228.0 328 48.5
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 4.5e-57 225.7 302 50.7
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 7.6e-57 224.9 318 49.7
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 2.2e-56 223.4 286 52.1
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 6.5e-56 221.9 306 50.3
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 1.4e-55 220.7 329 49.5
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 3.6e-54 216.1 308 51.0
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 4.3e-52 209.1 286 46.5
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 7.4e-52 208.4 317 48.9
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 8.2e-51 204.9 335 48.7
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 1.8e-50 203.8 335 49.3
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 2.4e-50 203.4 307 47.6
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 3.4e-49 199.5 333 43.8
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 1.3e-48 197.6 334 44.3
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 2.2e-48 196.8 344 39.8
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 3.8e-48 196.1 277 48.0
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 8.5e-48 194.9 295 47.1
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 5.5e-47 192.2 310 48.1
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 9.4e-47 191.4 352 38.9
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 2.7e-46 189.9 347 40.9
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 7.9e-46 188.3 312 41.3
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 1.1e-44 184.5 333 43.2
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 1.5e-44 184.1 310 47.4
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 3.3e-44 183.0 357 38.9
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 3.3e-44 183.0 249 44.6
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 4.4e-44 182.6 356 42.1
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 7.4e-44 181.8 327 41.0
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 9.7e-44 181.4 370 40.3
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 1.7e-43 180.6 353 40.2
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 2.2e-43 180.3 331 39.6
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 1.1e-42 177.9 344 39.5
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 2.4e-42 176.8 299 41.1
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 2.4e-42 176.8 270 44.1
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 3.1e-42 176.4 289 43.9
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 3.1e-42 176.4 321 39.9
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 4.1e-42 176.0 349 39.0
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 6.9e-42 175.3 327 42.5
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 2.6e-41 173.3 208 52.4
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 3.4e-41 172.9 316 40.5
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 3.4e-41 172.9 302 40.7
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 3.4e-41 172.9 326 42.9
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 4.5e-41 172.6 298 41.3
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 4.5e-41 172.6 298 40.3
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 4.5e-41 172.6 351 39.3
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 1.0e-40 171.4 306 39.5
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 1.3e-40 171.0 269 45.4
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 2.9e-40 169.9 347 38.9
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 3.8e-40 169.5 260 45.4
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 6.5e-40 168.7 291 42.3
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 1.1e-39 167.9 269 44.6
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 2.5e-39 166.8 335 37.0
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 3.2e-39 166.4 336 37.5
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 9.4e-39 164.9 332 38.6
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 1.2e-38 164.5 299 45.2
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 1.6e-38 164.1 315 39.4
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 2.1e-38 163.7 317 37.9
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 4.7e-38 162.5 320 39.1
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 6.1e-38 162.2 135 67.4
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 7.9e-38 161.8 344 38.1
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 1.0e-37 161.4 278 39.9
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 1.4e-37 161.0 302 40.4
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 5.2e-37 159.1 347 35.7
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 3.3e-36 156.4 327 37.6
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.7e-35 154.1 196 57.7
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 1.8e-34 150.6 253 40.7
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 3.1e-34 149.8 329 40.4
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 4.1e-34 149.4 339 35.1
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 1.6e-33 147.5 334 36.8
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 5.9e-33 145.6 279 40.5
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 1.7e-32 144.1 285 40.4
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 1.7e-32 144.1 238 40.8
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 5.0e-32 142.5 290 39.7
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 5.0e-32 142.5 324 35.8
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 1.1e-31 141.4 326 36.2
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 4.2e-31 139.4 330 35.8
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 1.6e-30 137.5 200 43.5
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 2.7e-30 136.7 228 43.0
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 8.0e-30 135.2 290 39.7
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 1.0e-29 134.8 284 42.3
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 1.0e-29 134.8 228 42.5
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 1.8e-29 134.0 242 41.3
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 5.2e-29 132.5 337 34.1
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 5.2e-29 132.5 263 37.6
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 8.8e-29 131.7 221 40.7
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 1.2e-28 131.3 188 46.8
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 2.0e-28 130.6 213 42.7
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 2.6e-28 130.2 260 38.8
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 2.6e-28 130.2 290 39.0
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 7.5e-28 128.6 319 35.7
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 9.7e-28 128.3 221 41.2
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 1.3e-27 127.9 290 38.3
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 1.3e-27 127.9 290 37.9
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 1.3e-27 127.9 294 38.4
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 2.8e-27 126.7 295 35.6
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 1.1e-26 124.8 320 36.9
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 2.2e-19 100.5 111 51.4
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 2.0e-17 94.0 177 37.9
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 3.6e-14 83.2 271 29.5
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 8.0e-14 82.0 251 30.3
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 1.5e-12 77.8 64 54.7
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 2.8e-11 73.6 147 38.1
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 1.1e-10 71.6 212 32.1
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 3.1e-10 70.1 127 41.7
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 7.0e-10 68.9 208 31.2
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 1.7e-08 64.3 56 62.5
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.6e-06 57.8 96 44.8
MD04G1246500 Malus domestica HOM05D005724 ORTHO05D006636 6.1e-06 55.8 130 35.4


User provided reference genes

Program Settings