Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.1e-110 401.4 195 100.0
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.1e-66 254.6 175 77.7
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 8.0e-58 227.6 124 89.5
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 8.0e-58 227.6 147 78.9
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.5e-56 223.4 173 71.7
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.5e-56 223.4 124 87.9
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.5e-56 223.4 124 87.9
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 2.6e-56 222.6 124 88.7
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 9.8e-56 220.7 122 90.2
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 9.8e-56 220.7 124 87.1
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 9.8e-56 220.7 124 87.1
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 2.2e-55 219.5 120 90.0
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 3.7e-55 218.8 124 86.3
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 3.7e-55 218.8 124 86.3
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.1e-54 217.2 123 86.2
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 7.0e-54 214.5 124 85.5
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.6e-53 213.4 195 63.1
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 5.0e-52 208.4 124 83.9
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 5.0e-52 208.4 124 83.9
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 5.0e-52 208.4 124 83.9
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 1.2e-50 203.8 109 92.7
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 7.1e-46 188.0 109 86.2
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 2.3e-44 183.0 124 77.4
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 2.1e-42 176.4 101 87.1
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.1e-41 174.1 98 89.8
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 7.8e-37 157.9 95 78.9
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.3e-36 157.1 89 86.5
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.0e-36 156.0 97 81.4
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.1e-36 155.2 113 71.7
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 8.6e-36 154.5 114 73.7
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 2.4e-33 146.4 79 93.7
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 2.4e-33 146.4 79 93.7
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 3.1e-33 146.0 87 87.4
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 4.0e-33 145.6 79 92.4
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 6.9e-33 144.8 88 83.0
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 9.0e-33 144.4 79 92.4
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.2e-32 144.1 88 84.1
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 3.4e-32 142.5 79 91.1
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 3.4e-32 142.5 86 79.1
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 1.3e-31 140.6 91 74.7
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.7e-31 140.2 79 89.9
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.1e-30 137.5 124 61.3
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 3.2e-30 136.0 78 87.2
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 2.3e-28 129.8 88 76.1
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 7.3e-27 124.8 65 90.8
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 3.1e-25 119.4 88 73.9
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.3e-25 118.6 71 78.9
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 6.9e-25 118.2 78 73.1
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 2.6e-24 116.3 64 92.2
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.7e-23 113.6 65 90.8
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 6.4e-23 111.7 64 85.9
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 8.4e-23 111.3 72 81.9
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 1.9e-22 110.2 62 90.3
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 1.9e-22 110.2 62 90.3
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 1.9e-22 110.2 62 90.3
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 1.9e-22 110.2 62 90.3
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 1.9e-22 110.2 96 68.8
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 1.0e-20 104.4 56 91.1
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.8e-20 103.6 107 60.7
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 5.1e-20 102.1 54 94.4
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 5.1e-20 102.1 54 94.4
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 5.1e-20 102.1 54 94.4
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 8.7e-20 101.3 55 92.7
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.9e-19 100.1 101 55.4
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 7.4e-19 98.2 54 90.7
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.7e-18 95.9 56 85.7
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 4.8e-18 95.5 53 90.6
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 3.4e-16 89.4 156 41.0
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 3.4e-16 89.4 65 64.6
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.7e-15 87.0 68 60.3
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 6.7e-12 75.1 63 60.3
Lsat_1_v5_gn_4_66021 Lactuca sativa HOM05D002965 ORTHO05D010183 2.4e-09 66.6 34 85.3
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 3.4e-08 62.8 36 86.1
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 7.6e-08 61.6 54 63.0
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 2.2e-07 60.1 36 77.8
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 6.5e-07 58.5 34 79.4
Medtr3g463160 Medicago truncatula HOM05D021415 ORTHO05D010725 4.2e-06 55.8 31 74.2


User provided reference genes

Program Settings