Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005613g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 9.4e-110 400.2 202 100.0
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 3.9e-39 165.6 149 61.1
Nitab4.5_0002558g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.6e-37 160.2 169 56.8
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.1e-37 157.9 151 57.6
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 7.6e-35 151.4 151 57.0
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.8e-34 149.1 145 59.3
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-32 144.1 149 54.4
Nitab4.5_0005246g0040 Nicotiana tabacum HOM05D007924 ORTHO05D007069 1.2e-27 127.5 76 89.5
Peaxi162Scf00863g00003 Petunia axillaris HOM05D002965 ORTHO05D011068 1.2e-27 127.5 61 93.4
Nitab4.5_0000517g0080 Nicotiana tabacum HOM05D007924 ORTHO05D285062 7.6e-27 124.8 83 80.7
Nitab4.5_0001796g0200 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.9e-26 122.1 75 76.0
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.1e-25 120.9 68 83.8
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.0e-23 112.8 68 79.4
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 5.1e-23 112.1 55 90.9
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 6.7e-23 111.7 89 64.0
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 6.9e-20 101.7 63 76.2
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.3e-18 97.4 55 83.6
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.3e-18 97.4 58 75.9
ECA246G1890 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-17 94.0 54 79.6
Nitab4.5_0001763g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.9e-17 93.6 99 54.5
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 3.2e-17 92.8 98 54.1
Nitab4.5_0002558g0120 Nicotiana tabacum HOM05D007924 ORTHO05D017087 9.3e-17 91.3 50 92.0
Nitab4.5_0000172g0670 Nicotiana tabacum HOM05D013495 ORTHO05D284186 2.1e-16 90.1 50 90.0
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 7.9e-16 88.2 60 68.3
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 8.7e-15 84.7 46 87.0
Nitab4.5_0001796g0220 Nicotiana tabacum HOM05D007924 ORTHO05D017087 4.3e-14 82.4 59 78.0
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 9.6e-14 81.3 76 64.5
PGSC0003DMG400017419 Solanum tuberosum HOM05D002965 ORTHO05D011068 1.3e-13 80.9 79 57.0
SHI27034 Sapria himalayana HOM05D023343 ORTHO05D011068 1.6e-13 80.5 42 85.7
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 2.1e-13 80.1 166 38.0
ClCG01G010190 Citrullus lanatus HOM05D042035 ORTHO05D016641 4.1e-12 75.9 43 79.1
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 4.1e-12 75.9 45 84.4
Peaxi162Scf02014g00001 Petunia axillaris HOM05D016050 ORTHO05D011068 1.2e-11 74.3 47 76.6
SHI25680 Sapria himalayana HOM05D022652 ORTHO05D011068 2.0e-11 73.6 42 78.6
Nitab4.5_0000859g0140 Nicotiana tabacum HOM05D002965 ORTHO05D011068 7.6e-11 71.6 60 68.3
CSS0045201 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D011068 1.7e-10 70.5 46 78.3
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-10 70.5 71 59.2
Haze_01424 Corylus avellana HOM05D022652 ORTHO05D011068 4.2e-09 65.9 185 31.4
Haze_01425 Corylus avellana HOM05D022652 ORTHO05D011068 4.2e-09 65.9 185 31.4
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.7e-08 63.2 30 90.0
SHI27232 Sapria himalayana HOM05D022652 ORTHO05D011068 2.7e-08 63.2 42 64.3
Nitab4.5_0002072g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.6e-08 62.4 33 84.8
Nitab4.5_0000215g0070 Nicotiana tabacum HOM05D002965 ORTHO05D011068 6.1e-08 62.0 41 75.6
Eucgr.C02171 Eucalyptus grandis HOM05D002965 ORTHO05D011068 1.3e-07 60.8 42 71.4
Nitab4.5_0000215g0080 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.9e-07 59.3 49 55.1
Nitab4.5_0000886g0150 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.5e-06 57.4 98 39.8


User provided reference genes

Program Settings