Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 4.0e-105 385.2 260 100.0
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 5.1e-60 235.3 301 63.8
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 7.2e-54 214.9 291 59.1
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 3.0e-52 209.5 345 54.2
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 2.0e-27 127.1 171 48.0
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.8e-25 120.6 160 48.8
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 4.1e-25 119.4 171 48.5
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.9e-23 113.2 139 56.1
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.9e-22 110.5 264 38.3
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 2.5e-22 110.2 266 36.5
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 7.3e-22 108.6 139 50.4
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 2.8e-21 106.7 139 48.9
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 2.8e-21 106.7 139 49.6
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 2.8e-21 106.7 148 46.6
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 8.0e-21 105.1 143 50.3
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 1.0e-20 104.8 146 47.9
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.8e-20 104.0 145 48.3
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 3.0e-20 103.2 61 77.0
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 3.0e-20 103.2 61 77.0
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 5.2e-20 102.4 142 45.1
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.2e-19 101.3 140 50.7
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.5e-19 100.9 140 47.1
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 2.6e-19 100.1 150 44.7
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.6e-19 100.1 116 53.4
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 3.4e-19 99.8 139 47.5
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 4.4e-19 99.4 170 42.9
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 4.4e-19 99.4 200 42.5
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 5.8e-19 99.0 156 43.6
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.3e-18 97.8 120 48.3
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 1.7e-18 97.4 153 45.1
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 1.7e-18 97.4 178 39.9
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 4.9e-18 95.9 166 43.4
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.4e-17 94.4 205 41.0
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 9.2e-17 91.7 266 33.1
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.2e-16 91.3 122 46.7
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 1.6e-16 90.9 139 42.4
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 2.7e-16 90.1 253 40.7
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 7.8e-16 88.6 150 43.3
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 7.8e-16 88.6 149 44.3
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.0e-15 88.2 142 45.8
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.3e-15 87.8 277 32.5
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.7e-15 87.4 210 38.1
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.7e-15 87.4 148 45.9
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 3.0e-15 86.7 140 37.9
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 3.0e-15 86.7 145 44.8
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 3.9e-15 86.3 160 43.1
Peaxi162Scf00354g00210 Petunia axillaris HOM05D015445 ORTHO05D008750 6.6e-15 85.5 243 35.8
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 8.6e-15 85.1 139 46.8
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.1e-14 84.7 97 48.5
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.5e-14 83.6 160 41.2
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 3.3e-14 83.2 102 48.0
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 4.3e-14 82.8 62 62.9
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 4.3e-14 82.8 81 54.3
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 5.6e-14 82.4 163 41.7
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 7.3e-14 82.0 284 33.1
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 1.2e-13 81.3 64 64.1
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 1.2e-13 81.3 250 44.0
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.2e-13 81.3 116 44.0
Nitab4.5_0004587g0040 Nicotiana tabacum HOM05D015445 ORTHO05D025892 1.6e-13 80.9 241 35.3
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 2.8e-13 80.1 146 39.0
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 3.6e-13 79.7 122 50.0
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 8.0e-13 78.6 154 40.3
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 1.1e-12 78.2 154 40.9
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 1.4e-12 77.8 154 40.3
Nitab4.5_0001509g0010 Nicotiana tabacum HOM05D015445 ORTHO05D025892 1.4e-12 77.8 241 36.1
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 2.3e-12 77.0 80 53.8
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 4.0e-12 76.3 143 46.9
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 5.2e-12 75.9 148 37.2
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 5.2e-12 75.9 159 41.5
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 6.8e-12 75.5 153 37.9
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 2.0e-11 73.9 96 46.9
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 2.0e-11 73.9 147 38.1
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 2.6e-11 73.6 109 43.1
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 1.7e-10 70.9 155 38.1
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 2.2e-10 70.5 114 48.2
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 4.9e-10 69.3 123 45.5
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 6.4e-10 68.9 131 45.0
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 4.1e-09 66.2 72 47.2
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 5.4e-09 65.9 84 42.9
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 2.7e-08 63.5 125 42.4
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 4.6e-08 62.8 127 36.2
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 6.0e-08 62.4 140 35.7
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 7.8e-08 62.0 135 38.5
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 7.8e-08 62.0 157 32.5
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 1.0e-07 61.6 132 40.9
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 1.3e-07 61.2 87 47.1
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.3e-07 60.5 115 45.2
Os07g0656300 Oryza sativa ssp. japonica HOM05D022794 ORTHO05D023027 2.3e-07 60.5 76 47.4
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 2.3e-07 60.5 245 29.8
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 3.0e-07 60.1 140 34.3
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 3.0e-07 60.1 140 33.6
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 3.9e-07 59.7 140 33.6
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 5.0e-07 59.3 254 33.5
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 6.6e-07 58.9 131 38.2
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 4.3e-06 56.2 251 29.9


User provided reference genes

Program Settings