Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 4.5e-244 847.4 409 100.0
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.2e-198 695.7 355 93.8
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.1e-157 560.5 358 77.9
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 1.3e-153 547.0 359 74.9
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 1.8e-147 526.6 360 73.6
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 9.6e-146 520.8 360 72.5
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 1.6e-124 450.3 330 70.9
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 7.9e-124 448.0 359 64.9
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 1.0e-86 324.7 372 47.8
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.9e-86 323.2 358 48.9
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.0e-83 314.7 365 47.7
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 1.9e-80 303.9 357 47.1
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 4.1e-80 302.8 366 45.4
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 6.0e-79 298.9 366 46.4
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.7e-78 297.4 357 45.1
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.3e-78 297.0 372 43.5
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.9e-78 296.2 379 44.1
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 6.6e-78 295.4 395 44.6
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 8.6e-78 295.0 373 43.2
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 4.3e-77 292.7 368 45.9
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.1e-76 290.4 365 45.5
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 8.0e-76 288.5 357 45.9
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.1e-75 286.6 374 45.2
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 5.2e-75 285.8 367 43.3
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 6.8e-75 285.4 358 45.8
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 1.5e-74 284.3 347 44.1
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 4.1e-72 276.2 356 45.5
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 6.0e-71 272.3 321 46.7
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.3e-70 270.4 369 44.2
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 1.1e-69 268.1 380 42.9
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.3e-69 266.5 336 45.2
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 8.1e-68 261.9 357 42.6
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.1e-67 261.5 356 40.7
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 5.2e-67 259.2 358 41.6
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.2e-66 258.1 397 40.3
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 1.2e-66 258.1 359 41.2
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 1.1e-64 251.5 362 42.5
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 4.1e-64 249.6 381 37.3
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 9.6e-61 238.4 380 38.7
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.4e-59 234.6 373 37.0
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 1.4e-59 234.6 251 51.0
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 4.4e-58 229.6 330 42.1
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 6.4e-57 225.7 370 37.0
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 1.9e-56 224.2 316 41.5
CAN.G504.34 Capsicum annuum HOM05D007794 ORTHO05D009810 4.6e-55 219.5 364 36.0
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 2.8e-52 210.3 249 46.6
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.9e-51 205.7 379 35.1
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.0e-50 204.1 180 55.6
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.8e-50 202.6 380 34.7
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 2.2e-49 200.7 358 37.7
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 4.2e-48 196.4 324 41.7
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.7e-47 193.7 382 34.3
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 3.9e-46 189.9 337 36.2
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 9.6e-45 185.3 401 33.7
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.7e-33 147.9 313 37.4
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 9.3e-32 142.1 219 37.9
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 1.2e-31 141.7 216 38.0
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 3.9e-30 136.7 162 46.9
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.5e-29 134.0 166 39.2
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.5e-29 134.0 214 32.7
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.2e-28 129.4 159 44.7
Rhsim05G0099100 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.1e-27 126.7 299 31.8
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.3e-27 126.3 210 36.7
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 4.5e-26 123.2 160 41.9
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.7e-25 121.3 235 31.5
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 6.5e-25 119.4 385 28.3
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.9e-24 117.9 200 35.5
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.5e-24 116.3 109 60.6
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 1.3e-22 111.7 382 28.0
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.3e-22 110.9 209 34.4
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 8.2e-20 102.4 165 37.6
Ciclev10029800m.g Citrus clementina HOM05D007794 ORTHO05D009810 5.3e-19 99.8 268 31.3
Migut.C00208 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.9e-19 99.4 124 38.7
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 2.0e-18 97.8 190 36.3
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 3.4e-18 97.1 185 34.6
PGSC0003DMG400005121 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.0e-17 95.5 56 80.4
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 3.2e-16 90.5 191 31.4
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.2e-16 89.4 118 34.7
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 2.1e-15 87.8 168 37.5
Peaxi162Scf00152g00088 Petunia axillaris HOM05D007794 ORTHO05D009810 3.9e-14 83.6 72 54.2
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 8.8e-14 82.4 345 24.6
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-13 82.0 352 25.9
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 3.3e-13 80.5 133 38.3
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-12 77.4 152 35.5
Sed0022040 Sechium edule HOM05D008995 ORTHO05D000074 1.1e-11 75.5 367 27.0
AUR62024918 Chenopodium quinoa HOM05D000587 ORTHO05D001561 1.4e-11 75.1 378 24.3
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.1e-11 73.9 257 25.3
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.3e-11 73.2 247 27.1
Aqoxy2G00614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-10 72.0 125 36.0
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.6e-10 70.9 237 26.6
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.6e-10 70.9 248 27.8
Rhsim05G0099500 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.4e-10 70.5 60 61.7
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 7.7e-10 69.3 396 23.5
TAR369G0060 Trochodendron aralioides HOM05D001286 ORTHO05D000440 7.7e-10 69.3 384 23.7
Dinv07015 Davidia involucrata HOM05D000151 ORTHO05D000074 1.7e-09 68.2 155 32.3
Dinv00092 Davidia involucrata HOM05D000151 ORTHO05D000074 6.5e-09 66.2 199 28.6
MBI19_g41824_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.5e-09 66.2 215 27.4
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.5e-09 65.9 123 30.1
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 8.5e-09 65.9 135 31.9
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 8.5e-09 65.9 153 26.1
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 8.5e-09 65.9 197 30.5
Dinv37646 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-08 65.5 363 25.3
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-08 65.5 360 24.2
MSTRG.6367 Avicennia marina HOM05D000151 ORTHO05D000074 1.4e-08 65.1 92 37.0
MELO3C012271.2 Cucumis melo HOM05D008995 ORTHO05D000074 1.4e-08 65.1 384 23.7
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-08 65.1 362 23.5
Aqoxy7G03795 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-08 64.7 352 21.9
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 1.9e-08 64.7 403 22.3
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 2.5e-08 64.3 368 22.0
CsaV3_5G034520 Cucumis sativus L. HOM05D008995 ORTHO05D000074 4.2e-08 63.5 383 24.0
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.2e-08 63.5 199 25.6
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 5.5e-08 63.2 364 24.2
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 5.5e-08 63.2 95 41.1
FvH4_7g21590 Fragaria vesca HOM05D000151 ORTHO05D000074 9.4e-08 62.4 357 24.6
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-07 62.0 337 24.6
Ciclev10009143m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.2e-07 62.0 238 23.9
MD05G1357500 Malus domestica HOM05D000151 ORTHO05D000074 1.2e-07 62.0 129 32.6
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 1.2e-07 62.0 404 23.8
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 1.6e-07 61.6 352 23.6
Actinidia06437 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.7e-07 60.8 359 23.7
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.7e-07 60.8 186 25.3
Nitab4.5_0003585g0020 Nicotiana tabacum HOM05D001876 ORTHO05D000074 2.7e-07 60.8 174 25.3
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.7e-07 60.8 135 25.9
COL.COLO4_32420 Corchorus olitorius HOM05D007794 ORTHO05D009810 3.6e-07 60.5 114 38.6
MBI19_g34542_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.6e-07 60.5 206 27.2
Peaxi162Scf00038g02631 Petunia axillaris HOM05D000151 ORTHO05D000074 4.7e-07 60.1 368 25.0
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.7e-07 60.1 354 24.3
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.1e-07 59.7 143 29.4
Lj2P496T12 Lonicera japonica HOM05D000151 ORTHO05D000074 6.1e-07 59.7 156 34.6
Nitab4.5_0015521g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 6.1e-07 59.7 133 27.8
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.9e-07 59.3 162 30.2
QL11p053242 Quercus lobata HOM05D000151 ORTHO05D000074 7.9e-07 59.3 246 29.3
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 1.0e-06 58.9 143 29.4
FAN06G3083 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-06 58.9 208 27.4
Gohir.A11G013450 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.0e-06 58.9 358 24.3
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.0e-06 58.9 199 27.6
QL11p052366 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-06 58.9 161 32.3
QL11p053223 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-06 58.9 161 32.9
Lj2P493T22 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-06 58.5 156 32.7
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 1.8e-06 58.2 141 32.6
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.8e-06 58.2 211 25.6
PGSC0003DMG400006040 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.3e-06 57.8 142 27.5
TWI34G1020 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 2.3e-06 57.8 374 24.3
TAR376G0082 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.3e-06 57.8 342 24.6
Ah.01g023390 Amaranthus hybridus HOM05D000151 ORTHO05D000074 3.0e-06 57.4 138 26.8
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 3.0e-06 57.4 146 29.5
QL11p052376 Quercus lobata HOM05D000151 ORTHO05D000074 3.0e-06 57.4 238 29.0
Solyc11g005160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.0e-06 57.4 154 27.3
TAR371G0808 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.0e-06 57.4 350 22.0
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 3.9e-06 57.0 123 33.3
Medtr2g034630 Medicago truncatula HOM05D003035 ORTHO05D000440 3.9e-06 57.0 141 29.1
Peaxi162Scf00300g00043 Petunia axillaris HOM05D000151 ORTHO05D000074 3.9e-06 57.0 134 26.9
Solyc05g010540.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.9e-06 57.0 126 28.6
Sopen05g006300 Solanum pennellii HOM05D000151 ORTHO05D000074 3.9e-06 57.0 151 29.1
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 3.9e-06 57.0 134 31.3
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 3.9e-06 57.0 141 29.8
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 3.9e-06 57.0 374 23.3
CAN.G1489.3 Capsicum annuum HOM05D000151 ORTHO05D000074 5.1e-06 56.6 139 29.5
Rhsim05G0111900 Rhododendron simsii HOM05D008700 ORTHO05D010645 5.1e-06 56.6 50 56.0
Sopen08g030590 Solanum pennellii HOM05D000151 ORTHO05D000074 5.1e-06 56.6 396 22.5
TAR376G1185 Trochodendron aralioides HOM05D001286 ORTHO05D000440 5.1e-06 56.6 341 24.9
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 6.7e-06 56.2 154 29.2
EL10Ac2g04120 Beta vulgaris HOM05D000151 ORTHO05D000074 6.7e-06 56.2 365 23.8
Cc08_g06170 Coffea canephora HOM05D000151 ORTHO05D000074 6.7e-06 56.2 237 22.8
Peaxi162Scf00300g00317 Petunia axillaris HOM05D000151 ORTHO05D000074 6.7e-06 56.2 161 26.7
VMungo1080G0331 Vigna mungo HOM05D008995 ORTHO05D000074 6.7e-06 56.2 125 32.8
PGSC0003DMG400023604 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.8e-06 55.8 153 26.8


User provided reference genes

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