Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 8.3e-78 293.9 177 100.0
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.2e-29 132.1 121 76.9
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.1e-13 80.9 146 34.2
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.9e-13 80.1 146 34.9
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 2.5e-13 79.7 155 34.8
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 7.2e-13 78.2 178 34.8
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 9.3e-13 77.8 170 31.8
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.7e-12 76.3 157 35.7
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.5e-12 75.9 169 31.4
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 1.0e-11 74.3 149 38.3
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.3e-11 73.9 155 33.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.3e-11 73.9 148 35.1
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 2.3e-11 73.2 148 37.2
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 3.0e-11 72.8 152 33.6
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 3.0e-11 72.8 159 29.6
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 3.9e-11 72.4 147 32.0
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 5.1e-11 72.0 147 34.0
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 5.1e-11 72.0 157 35.7
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 8.7e-11 71.2 158 31.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 8.7e-11 71.2 149 36.9
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.1e-10 70.9 161 34.2
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 1.5e-10 70.5 173 39.9
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.9e-10 70.1 165 36.4
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.9e-10 70.1 161 30.4
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.5e-10 69.7 161 33.5
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 2.5e-10 69.7 161 34.2
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 3.3e-10 69.3 159 28.9
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 4.3e-10 68.9 152 32.9
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.3e-10 68.9 161 31.7
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 4.3e-10 68.9 162 30.2
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 7.4e-10 68.2 165 32.7
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 9.7e-10 67.8 159 28.9
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 9.7e-10 67.8 152 30.9
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 9.7e-10 67.8 158 34.2
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.3e-09 67.4 165 31.5
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.3e-09 67.4 165 27.9
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 1.6e-09 67.0 165 35.8
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 2.8e-09 66.2 167 28.1
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.7e-09 65.9 165 29.7
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 4.8e-09 65.5 180 32.8
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.8e-09 65.5 162 33.3
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 6.3e-09 65.1 168 26.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 6.3e-09 65.1 150 32.7
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 6.3e-09 65.1 157 29.9
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 6.3e-09 65.1 162 30.9
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.3e-09 65.1 152 28.9
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 8.2e-09 64.7 151 29.8
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.4e-08 63.9 155 28.4
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.4e-08 63.9 155 30.3
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.4e-08 63.2 155 29.0
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 3.1e-08 62.8 164 25.6
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.1e-08 62.8 153 27.5
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.1e-08 62.8 161 27.3
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 4.1e-08 62.4 162 24.7
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 5.3e-08 62.0 163 28.2
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 5.3e-08 62.0 150 27.3
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 5.3e-08 62.0 152 35.5
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 5.3e-08 62.0 145 31.0
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 5.3e-08 62.0 145 31.0
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 5.3e-08 62.0 146 30.8
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 6.9e-08 61.6 169 26.0
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.5e-07 60.5 159 26.4
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.5e-07 60.5 154 27.9
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.5e-07 60.5 160 40.0
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 2.6e-07 59.7 160 26.9
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 2.6e-07 59.7 154 27.9
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.4e-07 59.3 153 31.4
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 3.4e-07 59.3 154 27.9
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 4.5e-07 58.9 151 27.2
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 4.5e-07 58.9 152 27.6
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 5.9e-07 58.5 153 29.4
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 5.9e-07 58.5 158 31.6
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.7e-07 58.2 162 31.5
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.7e-07 58.2 161 32.3
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 7.7e-07 58.2 164 25.6
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 7.7e-07 58.2 164 25.6
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 1.0e-06 57.8 148 29.1
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 1.0e-06 57.8 178 33.1
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.3e-06 57.4 180 23.9
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 1.3e-06 57.4 152 27.6
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 2.2e-06 56.6 146 31.5
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 2.9e-06 56.2 156 25.6
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 3.8e-06 55.8 150 27.3
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 5.0e-06 55.5 145 29.7
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 5.0e-06 55.5 155 29.0
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 8.5e-06 54.7 148 27.7
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 8.5e-06 54.7 153 28.8
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 8.5e-06 54.7 157 26.8


User provided reference genes

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