Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 0.0e+00 1508.8 762 100.0
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 0.0e+00 1334.3 762 90.7
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 3.6e-303 1044.6 749 75.3
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 4.7e-303 1044.3 769 74.1
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 5.2e-286 987.6 767 71.4
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 3.7e-284 981.5 767 71.1
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 8.9e-262 907.1 692 71.7
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.5e-128 464.5 824 42.4
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 1.2e-109 401.7 765 40.7
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 5.1e-108 396.4 815 39.3
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 2.8e-106 390.6 765 38.6
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 2.6e-104 384.0 776 38.4
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 4.6e-93 346.7 813 36.3
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 8.8e-92 342.4 760 36.7
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 3.8e-87 327.0 761 35.9
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 4.7e-85 320.1 474 46.2
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 1.5e-83 315.1 805 33.3
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 2.9e-79 300.8 762 34.8
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 1.9e-78 298.1 817 33.0
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 5.2e-76 290.0 777 33.8
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 4.8e-74 283.5 463 43.6
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 1.4e-73 282.0 683 36.6
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 6.1e-69 266.5 499 40.3
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.1e-65 255.8 475 42.5
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 2.4e-65 254.6 258 57.4
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 9.1e-65 252.7 790 32.5
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 1.7e-63 248.4 757 32.4
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 4.2e-62 243.8 797 31.0
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 4.0e-60 237.3 219 62.1
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 5.2e-60 236.9 308 49.7
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 8.8e-60 236.1 807 31.8
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 1.2e-59 235.7 216 59.7
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 1.2e-59 235.7 213 59.2
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 2.6e-59 234.6 214 59.3
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 2.8e-58 231.1 214 58.9
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 2.8e-58 231.1 216 60.2
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 6.3e-58 229.9 215 58.6
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 1.1e-57 229.2 470 38.3
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 5.4e-57 226.9 402 42.0
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.6e-56 225.3 270 52.2
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 1.0e-55 222.6 226 56.6
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 2.3e-55 221.5 813 28.9
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 5.0e-55 220.3 600 33.3
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 1.5e-54 218.8 501 36.5
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 4.2e-54 217.2 806 28.9
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 5.5e-54 216.9 258 51.6
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 8.0e-53 213.0 287 48.8
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 2.3e-52 211.5 523 33.7
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 3.0e-52 211.1 219 56.6
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 3.0e-52 211.1 358 41.6
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 1.2e-51 209.1 799 29.4
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 4.4e-51 207.2 828 31.5
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 9.8e-51 206.1 553 33.3
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 3.1e-49 201.1 248 50.4
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 4.3e-46 190.7 852 27.9
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 5.2e-44 183.7 432 33.8
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 4.7e-37 160.6 175 50.3
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 1.8e-36 158.7 613 30.0
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.7e-34 152.1 213 43.7
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 8.6e-31 139.8 165 43.0
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 6.8e-28 130.2 190 39.5
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.7e-26 125.6 177 40.1
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 2.2e-26 125.2 103 65.0
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.1e-24 118.6 200 39.0
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.1e-24 118.6 200 39.0
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 3.6e-13 81.3 142 35.9
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 1.8e-12 79.0 476 25.4
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 9.9e-11 73.2 138 31.2
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 2.9e-10 71.6 47 70.2
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 4.2e-09 67.8 135 32.6
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 2.1e-08 65.5 48 64.6
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 5.1e-07 60.8 43 62.8


User provided reference genes

Program Settings