Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005558g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-38 160.6 75 100.0
Nitab4.5_0001199g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-25 118.6 63 87.3
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-20 100.9 68 63.2
Nitab4.5_0008635g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-20 100.9 57 73.7
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-20 99.8 57 73.7
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-19 97.8 57 71.9
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-19 97.8 57 73.7
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 8.2e-19 96.7 68 61.8
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-18 96.3 57 71.9
Nitab4.5_0005765g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-18 95.1 57 70.2
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-18 94.7 57 75.4
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.1e-18 94.4 68 60.3
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-18 94.4 57 71.9
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-18 94.4 54 75.9
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-18 94.4 57 68.4
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.3e-18 94.0 57 68.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.2e-17 92.8 68 60.3
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-17 92.8 57 66.7
Nitab4.5_0007229g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-17 92.8 57 66.7
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-17 92.0 57 66.7
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-17 92.0 57 68.4
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-17 91.3 68 57.4
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-17 90.9 56 66.1
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-17 90.5 57 66.7
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.7e-17 90.1 59 72.9
Peaxi162Scf00032g00919 Petunia axillaris HOM05D001309 ORTHO05D000385 1.0e-16 89.7 57 64.9
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-16 89.4 68 55.9
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-16 89.0 57 64.9
Nitab4.5_0000440g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-16 88.6 70 60.0
PGSC0003DMG400046524 Solanum tuberosum HOM05D001309 ORTHO05D000385 2.9e-16 88.2 57 64.9
Nitab4.5_0003339g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-16 87.8 65 58.5
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-16 87.8 55 69.1
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-16 87.8 73 57.5
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-16 87.4 57 63.2
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-16 87.4 69 55.1
Nitab4.5_0015781g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-16 87.4 57 64.9
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-15 86.3 54 68.5
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-15 85.5 55 67.3
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-15 85.5 54 66.7
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-15 85.5 66 54.5
Peaxi162Scf00524g00007 Petunia axillaris HOM05D001309 ORTHO05D000385 3.2e-15 84.7 56 64.3
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-15 84.3 54 64.8
Nitab4.5_0002459g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-15 84.0 54 66.7
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-15 83.6 57 61.4
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.4e-15 83.2 71 50.7
Nitab4.5_0000577g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-14 82.8 57 63.2
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-14 81.6 53 64.2
Nitab4.5_0001130g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-14 81.3 53 62.3
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-14 80.9 53 66.0
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-14 80.9 73 52.1
Nitab4.5_0005502g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-14 80.9 43 86.0
Nitab4.5_0000261g0180 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.0e-14 80.1 50 72.0
Nitab4.5_0026778g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.0e-14 80.1 43 83.7
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.0e-13 79.7 52 69.2
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-13 78.6 53 62.3
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-13 77.4 57 59.6
Nitab4.5_0004688g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-13 77.4 57 57.9
Nitab4.5_0008584g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-13 77.4 54 57.4
Nitab4.5_0006526g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.8e-13 77.0 49 63.3
Nitab4.5_0008623g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-12 75.5 68 50.0
Nitab4.5_0008994g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.5e-12 73.6 42 76.2
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-12 73.2 40 75.0
Nitab4.5_0008766g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-12 73.2 57 56.1
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-11 72.8 43 74.4
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.3e-11 70.1 53 60.4
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 1.4e-10 69.3 45 66.7
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-10 67.8 37 75.7
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.0e-10 67.0 57 52.6
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.1e-10 66.6 40 70.0
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-09 65.5 54 57.4
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.9e-08 61.6 56 50.0
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 1.1e-07 59.7 53 49.1
Nitab4.5_0000928g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-07 59.3 39 61.5
Nitab4.5_0010256g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-07 58.9 37 64.9
Nitab4.5_0002419g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-07 58.5 70 38.6
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 2.7e-06 55.1 70 35.7
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-06 54.7 70 35.7
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-06 54.7 70 35.7
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-06 54.7 70 35.7
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.1e-06 53.9 36 61.1
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 8.0e-06 53.5 70 31.4


User provided reference genes

Program Settings