Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.4e-127 459.5 218 100.0
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 3.8e-109 398.3 214 89.3
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 1.0e-101 373.6 188 92.6
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 4.3e-100 368.2 175 96.6
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 5.6e-100 367.9 175 97.1
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 5.6e-100 367.9 175 97.1
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 1.4e-98 363.2 175 95.4
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.8e-98 362.8 175 95.4
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.8e-98 362.8 175 95.4
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 1.8e-98 362.8 175 95.4
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 3.1e-98 362.1 175 94.3
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 3.1e-98 362.1 175 94.9
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 5.2e-98 361.3 175 94.9
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 6.8e-98 360.9 175 93.7
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 1.2e-97 360.1 175 94.3
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 1.5e-97 359.8 175 94.9
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.5e-97 359.8 175 94.3
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 1.5e-97 359.8 175 93.1
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 2.0e-97 359.4 175 93.7
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 2.0e-97 359.4 175 93.7
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 2.0e-97 359.4 175 93.1
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 2.0e-97 359.4 175 93.1
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 2.6e-97 359.0 175 93.1
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 2.6e-97 359.0 175 92.6
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 3.4e-97 358.6 175 93.7
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 3.4e-97 358.6 175 92.6
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 4.4e-97 358.2 175 93.1
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 5.8e-97 357.8 175 94.3
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 7.5e-97 357.5 175 93.7
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 9.8e-97 357.1 175 94.9
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 9.8e-97 357.1 175 92.0
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 1.7e-96 356.3 175 92.6
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 1.7e-96 356.3 175 92.0
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 1.7e-96 356.3 174 91.4
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 2.2e-96 355.9 174 93.1
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 2.2e-96 355.9 175 92.0
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 2.2e-96 355.9 172 93.0
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 2.9e-96 355.5 175 92.0
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 2.9e-96 355.5 175 92.0
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 2.9e-96 355.5 175 92.6
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 2.9e-96 355.5 173 92.5
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 2.9e-96 355.5 175 92.6
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 2.9e-96 355.5 175 93.1
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 3.7e-96 355.1 175 92.6
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 3.7e-96 355.1 175 92.0
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 4.9e-96 354.8 175 92.0
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 4.9e-96 354.8 175 92.0
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 4.9e-96 354.8 175 92.6
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 4.9e-96 354.8 175 92.6
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 4.9e-96 354.8 175 92.6
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 92.0
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 92.0
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 92.0
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 92.6
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 91.4
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 92.0
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 91.4
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 6.4e-96 354.4 175 92.0
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 8.3e-96 354.0 175 92.6
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 8.3e-96 354.0 175 91.4
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 8.3e-96 354.0 175 91.4
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 8.3e-96 354.0 175 92.6
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 1.1e-95 353.6 175 92.0
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 1.1e-95 353.6 173 93.6
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 1.1e-95 353.6 175 91.4
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.1e-95 353.6 175 91.4
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 1.4e-95 353.2 175 91.4
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 1.4e-95 353.2 175 92.6
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 1.4e-95 353.2 175 92.0
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 1.4e-95 353.2 177 92.7
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 1.9e-95 352.8 175 92.0
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 1.9e-95 352.8 175 92.0
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 1.9e-95 352.8 175 92.0
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 1.9e-95 352.8 175 92.0
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 1.9e-95 352.8 175 92.0
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 1.9e-95 352.8 174 92.5
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 2.4e-95 352.4 175 91.4
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 2.4e-95 352.4 173 94.2
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 2.4e-95 352.4 175 92.0
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 2.4e-95 352.4 174 92.0
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 3.2e-95 352.1 175 91.4
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 3.2e-95 352.1 175 92.6
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 3.2e-95 352.1 175 91.4
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 4.1e-95 351.7 174 91.4
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 4.1e-95 351.7 174 91.4
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 4.1e-95 351.7 176 90.3
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 5.4e-95 351.3 175 91.4
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 5.4e-95 351.3 174 90.2
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 7.0e-95 350.9 172 91.9
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 7.0e-95 350.9 175 92.6
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 9.2e-95 350.5 175 91.4
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 9.2e-95 350.5 175 90.9
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 1.2e-94 350.1 175 90.3
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 1.6e-94 349.7 175 91.4
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 1.6e-94 349.7 175 90.3
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 1.6e-94 349.7 175 92.0
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 2.0e-94 349.4 172 93.6
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 2.0e-94 349.4 172 93.6
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 3.5e-94 348.6 175 90.9
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 4.6e-94 348.2 175 90.9
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 4.6e-94 348.2 169 91.7
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 7.8e-94 347.4 175 90.3
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.7e-93 346.3 175 88.6
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 8.6e-93 344.0 174 90.8
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 4.3e-92 341.7 173 91.9
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 9.5e-92 340.5 175 90.3
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 2.8e-91 339.0 174 88.5
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 7.5e-89 330.9 175 86.3
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 2.9e-88 328.9 244 68.4
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 4.9e-88 328.2 175 84.0
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 7.8e-86 320.9 174 81.6
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 1.7e-85 319.7 174 80.5
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 5.6e-84 314.7 173 82.7
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 5.6e-84 314.7 181 85.1
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 4.0e-82 308.5 168 81.0
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 1.3e-80 303.5 150 90.7
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 1.4e-79 300.1 173 78.0
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 3.5e-78 295.4 175 74.9
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 3.4e-73 278.9 165 72.7
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 8.4e-72 274.2 167 79.6
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 1.4e-71 273.5 132 93.2
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 7.1e-71 271.2 131 92.4
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 3.5e-70 268.9 131 90.8
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 2.1e-67 259.6 164 69.5
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 2.7e-62 242.7 125 88.0
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 2.8e-59 232.6 124 85.5
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 5.8e-57 224.9 119 85.7
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 5.8e-57 224.9 112 90.2
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 4.6e-54 215.3 125 78.4
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 1.8e-53 213.4 114 86.8
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 1.1e-52 210.7 171 55.0
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 1.6e-51 206.8 112 80.4
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 1.3e-48 197.2 104 86.5
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 8.7e-45 184.5 142 64.8
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 1.5e-44 183.7 95 89.5
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 1.1e-36 157.5 177 52.5
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 1.9e-36 156.8 88 80.7
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 9.4e-31 137.9 109 62.4
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 1.0e-29 134.4 114 60.5
Nn5g29750 Nelumbo nucifera HOM05D005492 ORTHO05D006911 6.7e-29 131.7 66 90.9
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 1.0e-21 107.8 92 55.4


User provided reference genes

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