Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 2.1e-47 192.2 108 100.0
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 7.6e-42 173.7 97 100.0
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 1.1e-27 126.7 109 74.3
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 1.6e-23 112.8 116 68.1
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 4.7e-23 111.3 105 64.8
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 1.8e-22 109.4 110 60.9
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 6.7e-22 107.5 109 66.1
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 4.4e-21 104.8 111 59.5
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 1.7e-20 102.8 108 63.0
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 2.2e-20 102.4 107 60.7
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 6.3e-20 100.9 111 58.6
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 6.3e-20 100.9 107 62.6
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 1.1e-19 100.1 109 61.5
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 1.4e-19 99.8 106 60.4
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 1.4e-19 99.8 113 56.6
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 1.8e-19 99.4 112 59.8
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 3.1e-19 98.6 112 57.1
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 5.3e-19 97.8 111 58.6
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 5.3e-19 97.8 111 58.6
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 5.3e-19 97.8 111 58.6
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 6.9e-19 97.4 111 58.6
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 6.9e-19 97.4 111 58.6
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 6.9e-19 97.4 110 60.0
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 9.1e-19 97.1 107 60.7
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 9.1e-19 97.1 109 60.6
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 9.1e-19 97.1 110 58.2
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 9.1e-19 97.1 111 56.8
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 1.2e-18 96.7 112 58.9
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.5e-18 96.3 105 61.0
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 1.5e-18 96.3 111 56.8
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 2.0e-18 95.9 110 60.9
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 2.6e-18 95.5 110 58.2
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 3.4e-18 95.1 112 55.4
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 4.5e-18 94.7 108 54.6
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 4.5e-18 94.7 111 55.9
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 5.9e-18 94.4 111 58.6
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 5.9e-18 94.4 111 58.6
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 1.0e-17 93.6 107 54.2
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 1.0e-17 93.6 111 57.7
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 1.0e-17 93.6 112 57.1
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.0e-17 93.6 112 53.6
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 1.3e-17 93.2 107 57.9
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 2.2e-17 92.4 102 55.9
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 2.9e-17 92.0 110 52.7
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 5.0e-17 91.3 112 58.9
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 5.0e-17 91.3 108 57.4
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 5.0e-17 91.3 112 56.2
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 6.5e-17 90.9 110 56.4
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 6.5e-17 90.9 108 56.5
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 8.5e-17 90.5 112 58.0
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 8.5e-17 90.5 112 58.0
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.4e-16 89.7 108 51.9
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 1.4e-16 89.7 109 57.8
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.9e-16 89.4 110 54.5
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 1.9e-16 89.4 110 56.4
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 1.9e-16 89.4 111 55.9
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 3.2e-16 88.6 107 59.8
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 3.2e-16 88.6 112 56.2
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 3.2e-16 88.6 107 54.2
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 4.2e-16 88.2 110 54.5
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 1.2e-15 86.7 107 55.1
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.2e-15 86.7 100 60.0
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 1.2e-15 86.7 114 53.5
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 1.2e-15 86.7 107 56.1
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.6e-15 86.3 109 55.0
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 1.6e-15 86.3 109 54.1
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 2.1e-15 85.9 111 56.8
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.7e-15 85.5 109 55.0
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 2.7e-15 85.5 108 56.5
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 2.7e-15 85.5 107 53.3
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 2.7e-15 85.5 107 53.3
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 2.7e-15 85.5 114 55.3
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 6.1e-15 84.3 105 59.0
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 8.0e-15 84.0 109 54.1
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 1.0e-14 83.6 112 55.4
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 1.0e-14 83.6 113 54.9
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 1.4e-14 83.2 110 52.7
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.4e-14 83.2 111 54.1
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 2.3e-14 82.4 110 52.7
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 3.9e-14 81.6 110 50.0
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 3.9e-14 81.6 110 50.0
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 3.9e-14 81.6 110 50.0
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 3.9e-14 81.6 110 50.0
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 5.2e-14 81.3 104 54.8
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 5.2e-14 81.3 110 51.8
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 6.7e-14 80.9 110 51.8
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 6.7e-14 80.9 110 51.8
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 6.7e-14 80.9 110 51.8
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 8.8e-14 80.5 110 51.8
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 1.1e-13 80.1 107 51.4
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 1.5e-13 79.7 110 50.0
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.5e-13 79.7 107 49.5
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 2.0e-13 79.3 109 56.0
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 2.0e-13 79.3 107 55.1
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 2.6e-13 79.0 111 55.0
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 3.3e-13 78.6 113 50.4
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 3.3e-13 78.6 109 55.0
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 3.3e-13 78.6 110 50.0
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 5.7e-13 77.8 102 52.9
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 5.7e-13 77.8 102 52.9
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 5.7e-13 77.8 110 50.9
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 7.4e-13 77.4 112 50.9
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 7.4e-13 77.4 110 50.9
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 9.7e-13 77.0 110 49.1
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 9.7e-13 77.0 110 49.1
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 2.2e-12 75.9 112 50.0
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 4.8e-12 74.7 110 49.1
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 4.8e-12 74.7 110 49.1
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 6.3e-12 74.3 111 46.8
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 8.2e-12 73.9 110 49.1
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 3.1e-11 72.0 108 51.9
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 4.1e-11 71.6 109 46.8
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 5.3e-11 71.2 110 53.6
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 5.3e-11 71.2 107 48.6
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 7.0e-11 70.9 114 51.8
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.6e-10 69.7 72 55.6
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 1.7e-09 66.2 107 47.7
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 1.7e-09 66.2 112 45.5
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 2.9e-09 65.5 107 49.5
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 2.9e-09 65.5 107 49.5
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 2.9e-09 65.5 107 49.5
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 6.5e-09 64.3 105 43.8
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 1.5e-08 63.2 106 47.2
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 4.2e-08 61.6 103 49.5
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 7.2e-08 60.8 105 42.9
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 9.4e-08 60.5 105 42.9
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 1.8e-06 56.2 66 57.6


User provided reference genes

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