Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 4.4e-196 688.0 391 100.0
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 9.5e-159 563.9 394 83.2
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.3e-126 457.2 390 70.8
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 4.2e-122 442.2 394 68.3
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.0e-120 437.6 391 67.3
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.2e-57 228.0 236 51.7
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 4.1e-53 213.0 224 51.8
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 7.0e-53 212.2 232 50.0
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 9.2e-53 211.8 267 47.2
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 2.7e-52 210.3 394 38.6
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 1.0e-51 208.4 231 52.4
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.9e-51 206.8 225 52.0
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 1.9e-50 204.1 277 46.2
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 9.5e-50 201.8 234 51.3
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 9.5e-50 201.8 415 42.2
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 2.1e-49 200.7 250 46.4
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.4e-48 198.0 224 52.2
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.8e-48 197.6 252 45.6
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 1.8e-48 197.6 225 51.6
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 3.0e-48 196.8 227 51.1
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 4.0e-48 196.4 252 45.6
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 4.0e-48 196.4 257 47.1
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 1.5e-47 194.5 407 38.3
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 3.4e-47 193.4 400 37.0
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 1.3e-46 191.4 405 37.8
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 3.7e-46 189.9 236 46.2
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 6.4e-46 189.1 285 40.7
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 6.4e-46 189.1 238 50.4
Solyc08g082230.3 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.1e-45 188.3 216 55.1
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 1.2e-44 184.9 262 45.0
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 2.0e-44 184.1 235 47.2
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 2.0e-44 184.1 373 39.7
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.3e-43 181.4 206 50.5
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 1.3e-43 181.4 273 41.8
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 2.3e-43 180.6 376 37.0
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 3.0e-43 180.3 400 37.2
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 8.6e-43 178.7 399 35.8
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 1.9e-42 177.6 403 35.7
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.9e-42 177.6 403 35.7
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.9e-42 177.6 272 42.3
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.5e-42 177.2 263 42.2
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 2.5e-42 177.2 207 52.7
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.6e-42 176.0 403 35.5
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 7.3e-42 175.6 403 35.5
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 1.2e-41 174.9 377 36.3
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 2.8e-41 173.7 229 49.3
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 6.2e-41 172.6 240 44.2
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 6.2e-41 172.6 242 43.8
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 8.0e-41 172.2 229 45.9
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.8e-40 171.0 228 46.5
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 2.6e-39 167.2 261 41.8
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.3e-38 164.9 224 46.0
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 1.4e-37 161.4 248 43.5
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 2.4e-37 160.6 280 37.1
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 2.4e-37 160.6 342 33.6
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 3.2e-37 160.2 244 41.0
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.0e-36 157.5 243 37.9
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.7e-36 157.1 217 40.6
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 4.6e-36 156.4 243 37.9
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 6.0e-36 156.0 385 31.7
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 6.0e-36 156.0 242 40.1
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 7.8e-36 155.6 202 49.5
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 1.3e-35 154.8 285 36.8
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 8.6e-35 152.1 274 40.1
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.1e-34 151.8 326 33.4
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 1.9e-34 151.0 279 39.4
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 3.3e-34 150.2 270 37.8
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 7.3e-34 149.1 274 39.8
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 1.6e-33 147.9 401 31.9
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 1.4e-32 144.8 243 39.1
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 6.8e-32 142.5 356 32.9
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 7.5e-31 139.0 285 37.5
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 1.3e-30 138.3 247 38.5
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 3.7e-30 136.7 221 37.1
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 2.4e-29 134.0 235 39.1
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 2.4e-29 134.0 235 39.1
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 5.4e-29 132.9 235 39.1
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 9.2e-29 132.1 272 37.1
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 9.2e-29 132.1 262 37.8
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.2e-28 131.7 94 79.8
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 1.6e-28 131.3 245 40.0
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 3.9e-27 126.7 137 50.4
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 3.9e-27 126.7 236 37.7
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 3.3e-26 123.6 357 33.6
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 4.3e-26 123.2 206 41.3
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.6e-25 121.3 310 31.9
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 2.8e-25 120.6 161 44.7
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 5.8e-23 112.8 155 49.0
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 4.9e-22 109.8 183 42.6
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 8.4e-22 109.0 312 33.0
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 4.9e-14 83.2 197 33.5
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.9e-13 81.3 227 29.5
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.9e-13 81.3 227 29.5
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.9e-13 81.3 227 29.5
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 5.4e-13 79.7 218 29.8
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 4.6e-12 76.6 214 30.4
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 6.0e-12 76.3 227 29.1
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.3e-11 75.1 217 28.6
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.3e-11 75.1 214 30.4
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 2.3e-11 74.3 225 28.9
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 5.1e-11 73.2 215 32.6
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 1.5e-10 71.6 219 28.8
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.9e-10 71.2 244 27.0
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.9e-10 71.2 219 28.3
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.5e-10 70.9 210 30.5
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 3.3e-10 70.5 241 32.4
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 4.3e-10 70.1 260 28.8
Mapoly0014s0172 Marchantia polymorpha HOM05D029953 ORTHO05D009567 4.3e-10 70.1 246 25.6
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 7.3e-10 69.3 194 29.9
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 7.3e-10 69.3 268 23.1
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 9.6e-10 68.9 219 27.9
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 6.2e-09 66.2 206 29.1
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 8.1e-09 65.9 219 30.6
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 2.4e-08 64.3 218 27.5
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 2.4e-08 64.3 213 30.5
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 6.9e-08 62.8 214 30.4
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 1.2e-07 62.0 214 30.8
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 1.5e-07 61.6 242 21.9
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 2.0e-07 61.2 221 29.4
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.4e-07 60.5 271 25.8
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 5.8e-07 59.7 186 25.3
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 3.8e-06 57.0 138 31.2
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 3.8e-06 57.0 219 27.4
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 3.8e-06 57.0 242 26.0


User provided reference genes

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