Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 8.8e-154 547.0 286 100.0
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 6.1e-123 444.5 255 92.5
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 1.3e-109 400.2 256 83.2
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 1.9e-108 396.4 260 81.9
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 1.1e-106 390.6 260 81.5
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 5.1e-101 371.7 258 75.2
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 3.3e-76 289.3 239 64.0
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 1.3e-75 287.3 247 62.8
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 2.8e-75 286.2 247 61.9
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 1.1e-74 284.3 256 59.0
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 1.7e-72 276.9 260 60.4
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 2.2e-72 276.6 252 61.1
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 2.2e-72 276.6 254 62.6
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 6.4e-72 275.0 257 58.8
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 8.4e-72 274.6 265 58.1
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 1.4e-71 273.9 256 60.2
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 2.4e-71 273.1 256 58.2
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 5.5e-71 271.9 239 59.4
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 5.5e-71 271.9 253 62.8
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 2.7e-70 269.6 248 60.5
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 3.5e-70 269.2 253 58.5
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 3.5e-70 269.2 247 61.1
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 4.6e-70 268.9 249 58.2
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 4.6e-70 268.9 259 57.9
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 6.0e-70 268.5 250 60.8
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 6.0e-70 268.5 262 58.0
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 5.1e-69 265.4 237 59.9
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 1.1e-68 264.2 256 56.2
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 1.5e-68 263.8 244 59.0
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 5.6e-68 261.9 231 58.4
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 5.6e-68 261.9 247 62.3
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 9.6e-68 261.2 237 59.5
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 2.8e-67 259.6 246 57.7
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 3.7e-67 259.2 222 62.6
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 4.8e-67 258.8 244 59.8
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 6.2e-67 258.5 258 55.8
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 8.1e-67 258.1 256 54.3
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 1.1e-66 257.7 254 57.1
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 1.1e-66 257.7 239 59.4
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 9.0e-66 254.6 251 55.8
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 1.5e-65 253.8 264 53.8
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 2.6e-65 253.1 224 61.2
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 1.3e-64 250.8 244 56.1
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 1.3e-64 250.8 257 55.3
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 2.9e-64 249.6 240 57.9
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 2.9e-64 249.6 246 56.1
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 2.9e-64 249.6 256 53.9
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 1.4e-63 247.3 237 57.0
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 5.5e-63 245.4 219 59.8
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 5.5e-63 245.4 262 53.8
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 7.1e-63 245.0 236 58.1
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 1.2e-62 244.2 236 58.1
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 1.2e-62 244.2 236 57.6
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 2.1e-62 243.4 234 57.7
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 6.0e-62 241.9 242 55.4
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 7.9e-62 241.5 241 56.0
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 1.8e-61 240.4 241 56.8
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 3.9e-61 239.2 255 54.1
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 8.7e-61 238.0 256 53.5
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 1.1e-60 237.7 236 57.2
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 1.5e-60 237.3 237 57.0
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 1.9e-60 236.9 252 54.4
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 2.5e-60 236.5 236 56.8
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 3.3e-60 236.1 238 56.7
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 3.3e-60 236.1 256 52.7
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 5.7e-60 235.3 274 52.6
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 5.7e-60 235.3 257 53.7
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 7.4e-60 235.0 251 54.2
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 1.3e-59 234.2 244 54.9
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 1.3e-59 234.2 254 53.9
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 1.6e-59 233.8 238 56.7
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 1.6e-59 233.8 236 54.7
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 2.1e-59 233.4 240 55.8
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 2.1e-59 233.4 222 61.7
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 3.7e-59 232.6 264 50.8
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 3.1e-58 229.6 234 56.4
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 2.6e-57 226.5 234 55.6
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 3.4e-57 226.1 212 60.4
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 1.3e-56 224.2 238 58.0
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 1.7e-56 223.8 262 53.4
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 5.5e-55 218.8 238 55.5
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 7.2e-55 218.4 218 56.0
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 9.3e-55 218.0 205 58.5
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 3.6e-54 216.1 250 52.4
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 1.0e-53 214.5 194 59.3
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 1.5e-52 210.7 249 48.6
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 2.5e-52 209.9 186 61.3
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 5.7e-52 208.8 237 49.8
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 1.8e-50 203.8 196 55.6
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 4.1e-50 202.6 201 54.2
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 5.3e-50 202.2 223 53.4
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 1.7e-48 197.2 238 48.7
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 6.5e-48 195.3 201 53.2
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 2.7e-46 189.9 173 57.8
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 3.0e-45 186.4 175 58.9
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 1.1e-44 184.5 217 46.5
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 2.2e-43 180.3 175 57.1
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 1.1e-42 177.9 197 53.3
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 1.4e-42 177.6 171 55.0
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 2.4e-42 176.8 250 44.8
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 1.5e-41 174.1 243 41.6
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 2.0e-41 173.7 177 57.1
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 2.2e-40 170.2 174 57.5
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 7.9e-38 161.8 134 64.2
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 4.8e-27 125.9 248 36.3
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 2.4e-26 123.6 122 57.4
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 4.5e-25 119.4 108 62.0
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 2.3e-21 107.1 137 51.8
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 5.2e-21 105.9 375 26.7
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 2.7e-17 93.6 94 55.3
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 1.3e-16 91.3 73 65.8
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 1.4e-13 81.3 149 36.2
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 8.8e-13 78.6 89 51.7
C09p32190 Brassica napus HOM05D004766 ORTHO05D008768 2.6e-12 77.0 93 50.5
BolC1t04291H Brassica oleracea HOM05D004766 ORTHO05D008768 7.5e-12 75.5 80 53.8
A06p41130 Brassica napus HOM05D000061 ORTHO05D000050 1.4e-10 71.2 120 40.8
BraA06t27036Z Brassica rapa HOM05D000061 ORTHO05D000050 2.4e-10 70.5 86 50.0
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 3.1e-10 70.1 213 30.0
BcaC04g23924 Brassica carinata HOM05D004766 ORTHO05D039973 3.8e-08 63.2 111 36.0


User provided reference genes

Program Settings