Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005520g0060 Nicotiana tabacum HOM05D000146 ORTHO05D036907 1.6e-43 179.5 128 100.0
Solyc12g006690.2 Solanum lycopersicum HOM05D000146 ORTHO05D000178 9.7e-20 100.5 112 65.2
Sopen12g002640 Solanum pennellii HOM05D000146 ORTHO05D000178 9.7e-20 100.5 112 65.2
PGSC0003DMG400020682 Solanum tuberosum HOM05D000146 ORTHO05D000178 5.3e-18 94.7 112 72.3
Peaxi162Scf00984g00249 Petunia axillaris HOM05D000146 ORTHO05D000178 3.8e-16 88.6 112 49.1
CAN.G377.31 Capsicum annuum HOM05D000146 ORTHO05D000178 5.0e-16 88.2 112 46.4
Peaxi162Scf00560g00730 Petunia axillaris HOM05D000146 ORTHO05D000178 1.4e-13 80.1 47 68.1
Duzib150G1187 Durio zibethinus HOM05D000146 ORTHO05D000178 1.2e-12 77.0 112 42.0
HanXRQChr10g0316811 Helianthus annuus HOM05D000146 ORTHO05D000178 1.2e-12 77.0 121 43.8
Manes.14G129800 Manihot esculenta HOM05D000146 ORTHO05D000178 3.4e-12 75.5 112 40.2
Psat4g041360 Pisum sativum HOM05D000146 ORTHO05D000178 3.4e-12 75.5 126 38.9
TWI34G1111 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 3.4e-12 75.5 106 39.6
GSVIVG01015496001 Vitis vinifera HOM05D000146 ORTHO05D000178 3.4e-12 75.5 55 56.4
Cc06_g08850 Coffea canephora HOM05D000146 ORTHO05D000178 4.4e-12 75.1 47 66.0
VMungo1215G3171 Vigna mungo HOM05D000146 ORTHO05D000178 4.4e-12 75.1 47 63.8
Nn8g39382 Nelumbo nucifera HOM05D000146 ORTHO05D000178 5.7e-12 74.7 53 60.4
Cfa003341 Carpinus fangiana HOM05D000146 ORTHO05D000178 7.5e-12 74.3 112 39.3
Haze_25621 Corylus avellana HOM05D000146 ORTHO05D000178 7.5e-12 74.3 112 39.3
Hma1.2p1_0018F.1_g012710 Hydrangea macrophylla HOM05D000146 ORTHO05D000178 7.5e-12 74.3 54 66.7
MD02G1036300 Malus domestica HOM05D000146 ORTHO05D000178 7.5e-12 74.3 47 63.8
Potri.015G093400 Populus trichocarpa HOM05D000146 ORTHO05D000178 7.5e-12 74.3 47 63.8
Sabra15G0115000 Salix brachista HOM05D000146 ORTHO05D000178 7.5e-12 74.3 47 61.7
CiPaw.03G241200 Carya illinoinensis HOM05D000146 ORTHO05D000178 9.8e-12 73.9 106 38.7
vmacro20594 Vaccinium macrocarpon HOM05D000146 ORTHO05D000178 9.8e-12 73.9 55 56.4
vmacro23137 Vaccinium macrocarpon HOM05D000146 ORTHO05D000178 9.8e-12 73.9 55 56.4
Medtr4g113790 Medicago truncatula HOM05D000146 ORTHO05D000178 1.3e-11 73.6 47 59.6
Nn2g11953 Nelumbo nucifera HOM05D000146 ORTHO05D000178 1.3e-11 73.6 53 60.4
Cpa.g.sc75.60 Carica papaya HOM05D000146 ORTHO05D000178 1.7e-11 73.2 47 61.7
ClCG11G002900 Citrullus lanatus HOM05D000146 ORTHO05D000178 1.7e-11 73.2 47 66.0
Ciclev10008122m.g Citrus clementina HOM05D000146 ORTHO05D000178 2.2e-11 72.8 47 63.8
Atru.chr7.1187 Acer truncatum HOM05D000146 ORTHO05D000178 2.8e-11 72.4 47 59.6
Dinv41535 Davidia involucrata HOM05D000146 ORTHO05D000178 2.8e-11 72.4 47 63.8
HanXRQChr12g0356441 Helianthus annuus HOM05D000146 ORTHO05D000178 2.8e-11 72.4 55 60.0
Lalb_Chr12g0197791 Lupinus albus HOM05D000146 ORTHO05D000178 2.8e-11 72.4 112 39.3
MD15G1176500 Malus domestica HOM05D000146 ORTHO05D000178 2.8e-11 72.4 47 61.7
Phvul.003G162100 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 2.8e-11 72.4 110 40.9
Thecc.09G122300 Theobroma cacao HOM05D000146 ORTHO05D000178 2.8e-11 72.4 112 40.2
Ca_21701_v3 Cicer arietinum L. HOM05D000146 ORTHO05D000178 3.7e-11 72.0 110 39.1
Lsat_1_v5_gn_5_99040 Lactuca sativa HOM05D000146 ORTHO05D000178 3.7e-11 72.0 56 55.4
Manes.06G053600 Manihot esculenta HOM05D000146 ORTHO05D000178 3.7e-11 72.0 47 61.7
Dinv36555 Davidia involucrata HOM05D000146 ORTHO05D000178 4.8e-11 71.6 112 41.1
QL02p087657 Quercus lobata HOM05D000146 ORTHO05D000178 4.8e-11 71.6 47 59.6
TAR625G1288 Trochodendron aralioides HOM05D000146 ORTHO05D000178 4.8e-11 71.6 118 42.4
Lj4g0026868 Lotus japonicus HOM05D000146 ORTHO05D000178 6.3e-11 71.2 114 37.7
RcHm_v2.0_Chr2g0089181 Rosa chinensis HOM05D000146 ORTHO05D000178 6.3e-11 71.2 45 64.4
arahy.Tifrunner.gnm1.ann1.Q6EFFR Arachis hypogaea HOM05D000146 ORTHO05D000178 8.3e-11 70.9 47 59.6
arahy.Tifrunner.gnm1.ann1.WT21TW Arachis hypogaea HOM05D000146 ORTHO05D000178 8.3e-11 70.9 47 59.6
COL.COLO4_05754 Corchorus olitorius HOM05D000146 ORTHO05D000178 8.3e-11 70.9 111 39.6
Glyma.17G117300 Glycine max HOM05D000146 ORTHO05D000178 8.3e-11 70.9 111 40.5
Duzib168G2008 Durio zibethinus HOM05D000146 ORTHO05D000178 1.4e-10 70.1 112 39.3
Gohir.A05G018300 Gossypium hirsutum HOM05D000146 ORTHO05D000178 1.4e-10 70.1 106 39.6
Gohir.D05G019200 Gossypium hirsutum HOM05D000146 ORTHO05D000178 1.4e-10 70.1 106 39.6
Gorai.009G019600 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.4e-10 70.1 106 39.6
Prupe.7G239100 Prunus persica HOM05D000146 ORTHO05D000178 1.8e-10 69.7 113 38.1
MELO3C004520.2 Cucumis melo HOM05D000146 ORTHO05D000178 2.4e-10 69.3 47 61.7
CsaV3_2G002730 Cucumis sativus L. HOM05D000146 ORTHO05D000178 2.4e-10 69.3 47 61.7
TWI63G1805 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 2.4e-10 69.3 110 39.1
TAR383G1066 Trochodendron aralioides HOM05D000146 ORTHO05D000178 2.4e-10 69.3 118 40.7
Oeu029437.1 Olea europaea HOM05D000146 ORTHO05D000178 3.1e-10 68.9 46 58.7
PSO170G0592 Papaver somniferum HOM05D000146 ORTHO05D000178 3.1e-10 68.9 107 40.2
PSO455G0197 Papaver somniferum HOM05D000146 ORTHO05D000178 3.1e-10 68.9 107 40.2
VMungo1309G1686 Vigna mungo HOM05D000146 ORTHO05D000178 3.1e-10 68.9 42 69.0
ECA234G3779 Erigeron canadensis HOM05D000146 ORTHO05D000178 4.1e-10 68.6 113 36.3
CANSAT11G0610 Cannabis sativa HOM05D000146 ORTHO05D000178 5.4e-10 68.2 60 51.7
Os01g0174700 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D000178 5.4e-10 68.2 45 60.0
HPP92_019966 Vanilla planifolia HOM05D000146 ORTHO05D036907 5.4e-10 68.2 47 59.6
CSS0033971 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 7.0e-10 67.8 116 47.4
CSS0042768 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 7.0e-10 67.8 116 47.4
Glyma.05G009200 Glycine max HOM05D000146 ORTHO05D000178 7.0e-10 67.8 109 38.5
FvH4_1g03770 Fragaria vesca HOM05D000146 ORTHO05D000178 9.1e-10 67.4 41 65.9
FAN19G2365 Fragaria x ananassa HOM05D000146 ORTHO05D000178 9.1e-10 67.4 41 65.9
FAN26G1437 Fragaria x ananassa HOM05D000146 ORTHO05D000178 9.1e-10 67.4 41 65.9
Oeu042010.1 Olea europaea HOM05D000146 ORTHO05D000178 1.2e-09 67.0 46 56.5
Zm00001eb122700 Zea mays HOM05D000146 ORTHO05D000178 1.2e-09 67.0 115 35.7
Aqoxy7G02085 Aquilegia oxysepala HOM05D000146 ORTHO05D000178 1.6e-09 66.6 115 35.7
MBI04_g10422_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 1.6e-09 66.6 53 56.6
Oeu005639.1 Olea europaea HOM05D000146 ORTHO05D000178 1.6e-09 66.6 46 56.5
Phvul.009G198500 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 1.6e-09 66.6 40 70.0
PGR102G0704 Punica granatum HOM05D000146 ORTHO05D000178 1.6e-09 66.6 117 39.3
Sc18g0000750 Simmondsia chinensis HOM05D000146 ORTHO05D000178 1.6e-09 66.6 46 67.4
HPP92_019956 Vanilla planifolia HOM05D000146 ORTHO05D036907 1.6e-09 66.6 45 60.0
FAN23G0805 Fragaria x ananassa HOM05D000146 ORTHO05D000178 5.9e-09 64.7 41 63.4
Glyma.04G148400 Glycine max HOM05D000146 ORTHO05D000178 1.0e-08 63.9 122 34.4
Lj7C632G19 Lonicera japonica HOM05D000146 ORTHO05D000178 1.0e-08 63.9 43 62.8
Rhsim01G0077100 Rhododendron simsii HOM05D000146 ORTHO05D000178 1.0e-08 63.9 121 50.4
RhsimUnG0108300 Rhododendron simsii HOM05D000146 ORTHO05D000178 1.0e-08 63.9 121 50.4
Actinidia22007 Actinidia chinensis HOM05D000146 ORTHO05D000178 1.3e-08 63.5 39 66.7
Sed0012734 Sechium edule HOM05D000146 ORTHO05D000178 1.3e-08 63.5 102 40.2
Oeu029429.1 Olea europaea HOM05D000146 ORTHO05D000178 1.7e-08 63.2 46 52.2
Actinidia40450 Actinidia chinensis HOM05D000146 ORTHO05D000178 2.2e-08 62.8 39 61.5
TPR.G10705 Trifolium pratense HOM05D000146 ORTHO05D000178 2.2e-08 62.8 45 57.8
MBI01_g11874_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 3.8e-08 62.0 43 58.1
Aa31LG5G9050 Aethionema arabicum HOM05D000146 ORTHO05D000178 5.0e-08 61.6 107 37.4
EL10Ac8g18604 Beta vulgaris HOM05D000146 ORTHO05D000178 6.5e-08 61.2 46 58.7
AUR62033462 Chenopodium quinoa HOM05D000146 ORTHO05D000178 8.5e-08 60.8 105 37.1
A04p20470 Brassica napus HOM05D000146 ORTHO05D000178 1.1e-07 60.5 44 61.4
C04p56230 Brassica napus HOM05D000146 ORTHO05D000178 1.1e-07 60.5 44 61.4
BolC4t27149H Brassica oleracea HOM05D000146 ORTHO05D000178 1.1e-07 60.5 44 61.4
BraA04t17623Z Brassica rapa HOM05D000146 ORTHO05D000178 1.1e-07 60.5 44 61.4
AUR62011079 Chenopodium quinoa HOM05D000146 ORTHO05D000178 1.1e-07 60.5 106 41.5
Pp3c15_24770 Physcomitrium patens HOM05D000146 ORTHO05D000178 1.1e-07 60.5 43 58.1
HPP92_021809 Vanilla planifolia HOM05D000146 ORTHO05D000178 1.5e-07 60.1 45 51.1
Pp3c9_25100 Physcomitrium patens HOM05D000146 ORTHO05D000178 1.9e-07 59.7 43 55.8
CARHR118780 Cardamine hirsuta HOM05D000146 ORTHO05D000178 2.5e-07 59.3 44 61.4
TPR.G33270 Trifolium pratense HOM05D000146 ORTHO05D000178 4.2e-07 58.5 42 54.8
ATR1156G036 Amborella trichopoda HOM05D000146 ORTHO05D000178 5.5e-07 58.2 46 50.0
AL4G19740 Arabidopsis lyrata HOM05D000146 ORTHO05D000178 5.5e-07 58.2 44 59.1
AT2G26700 Arabidopsis thaliana HOM05D000146 ORTHO05D000178 5.5e-07 58.2 44 59.1
BcaB06g28103 Brassica carinata HOM05D000146 ORTHO05D000178 5.5e-07 58.2 45 55.6
Carub.0004s0704 Capsella rubella HOM05D000146 ORTHO05D000178 5.5e-07 58.2 44 59.1
Medtr6g004720 Medicago truncatula HOM05D000146 ORTHO05D000178 9.4e-07 57.4 42 52.4
DCAR_000350 Daucus carota HOM05D000146 ORTHO05D000178 1.2e-06 57.0 112 35.7
SEGI_16370 Sequoiadendron giganteum HOM05D000146 ORTHO05D000178 1.2e-06 57.0 43 51.2
Sp4g08880 Schrenkiella parvula HOM05D000146 ORTHO05D000178 2.1e-06 56.2 99 35.4
Thhalv10028571m.g Eutrema salsugineum HOM05D000146 ORTHO05D000178 2.7e-06 55.8 99 34.3
QL02p074419 Quercus lobata HOM05D000146 ORTHO05D000178 2.7e-06 55.8 42 52.4
COL.COLO4_07722 Corchorus olitorius HOM05D000146 ORTHO05D000178 3.6e-06 55.5 42 57.1
FAN05G4478 Fragaria x ananassa HOM05D000146 ORTHO05D000178 3.6e-06 55.5 43 48.8
Lsat_1_v5_gn_7_114220 Lactuca sativa HOM05D000146 ORTHO05D000178 3.6e-06 55.5 42 52.4
SEGI_02929 Sequoiadendron giganteum HOM05D000146 ORTHO05D000178 3.6e-06 55.5 43 51.2
Lalb_Chr14g0362791 Lupinus albus HOM05D000146 ORTHO05D000178 4.7e-06 55.1 42 50.0
MBI04_g38194_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 4.7e-06 55.1 44 56.8
Actinidia38743 Actinidia chinensis HOM05D000146 ORTHO05D000178 6.1e-06 54.7 43 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1245 Anthoceros agrestis HOM05D000146 ORTHO05D000178 6.1e-06 54.7 43 51.2
FvH4_6g49600 Fragaria vesca HOM05D000146 ORTHO05D000178 6.1e-06 54.7 43 48.8
FAN09G0545 Fragaria x ananassa HOM05D000146 ORTHO05D000178 6.1e-06 54.7 43 48.8
Oeu002782.1 Olea europaea HOM05D000146 ORTHO05D000178 6.1e-06 54.7 43 51.2
TWI38G0217 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 6.1e-06 54.7 42 57.1
unitig_747.g21636 Utricularia gibba HOM05D000146 ORTHO05D000178 6.1e-06 54.7 42 54.8
Ca_14019_v3 Cicer arietinum L. HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 50.0
Haze_14744 Corylus avellana HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 52.4
Migut.H01747 Erythranthe guttata HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 52.4
Glyma.16G070700 Glycine max HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 50.0
Glyma.19G060500 Glycine max HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 50.0
Gohir.D01G077500 Gossypium hirsutum HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 54.8
Gorai.002G102000 Gossypium raimondii HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 54.8
Lj1g0013737 Lotus japonicus HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 47.6
Phvul.008G154000 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 50.0
SMO119G0277 Selaginella moellendorffii HOM05D000146 ORTHO05D000178 8.0e-06 54.3 43 51.2
SMO143G0153 Selaginella moellendorffii HOM05D000146 ORTHO05D000178 8.0e-06 54.3 44 50.0
TWI39G1044 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 54.8
VMungo0464G1962 Vigna mungo HOM05D000146 ORTHO05D000178 8.0e-06 54.3 42 47.6


User provided reference genes

Program Settings