Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-37 158.3 74 100.0
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-29 132.5 70 90.0
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-28 129.4 70 88.6
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-28 127.9 70 87.1
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-28 127.5 70 88.6
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-28 127.5 70 87.1
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.3e-28 126.7 70 85.7
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.6e-28 126.3 70 85.7
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-27 125.9 70 87.1
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-27 125.6 67 89.6
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.6e-27 125.6 70 85.7
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.1e-27 123.2 70 84.3
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.3e-26 120.6 70 80.0
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.0e-26 119.8 70 82.9
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.5e-25 119.0 70 84.3
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 2.0e-25 118.6 70 80.0
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.6e-25 116.7 70 81.4
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-24 115.9 70 80.0
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.8e-24 114.4 70 82.9
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.4e-24 113.6 70 77.1
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.4e-24 113.6 70 78.6
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-23 111.3 70 80.0
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-22 109.4 71 73.2
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.1e-22 108.6 67 77.6
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.0e-22 107.1 70 75.7
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.1e-21 104.0 71 74.6
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.5e-17 90.9 69 63.8
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 9.9e-17 89.7 67 64.2
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-16 88.2 70 61.4
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-16 88.2 72 58.3
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 4.9e-16 87.4 73 58.9
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 6.4e-16 87.0 67 61.2
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 8.4e-16 86.7 68 58.8
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.4e-15 85.9 68 55.9
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.4e-15 85.1 67 61.2
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.2e-15 84.7 67 59.7
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.2e-15 84.7 67 59.7
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 4.2e-15 84.3 68 57.4
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-15 84.0 67 59.7
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 7.1e-15 83.6 68 58.8
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.1e-15 83.6 67 59.7
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.3e-15 83.2 71 60.6
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 9.3e-15 83.2 73 54.8
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 1.2e-14 82.8 73 57.5
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.6e-14 82.4 67 58.2
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.7e-14 81.6 67 59.7
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 4.6e-14 80.9 68 55.9
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 4.6e-14 80.9 67 56.7
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 6.0e-14 80.5 68 58.8
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 6.0e-14 80.5 67 59.7
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.0e-13 79.7 67 53.7
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-13 79.3 68 55.9
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.3e-13 79.3 62 59.7
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-13 79.0 70 51.4
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.3e-13 78.6 64 56.2
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-13 77.8 70 52.9
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 5.1e-13 77.4 68 54.4
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 5.1e-13 77.4 63 54.0
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 6.7e-13 77.0 68 52.9
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.7e-13 76.6 64 57.8
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 1.1e-12 76.3 63 54.0
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 1.9e-12 75.5 62 58.1
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 2.5e-12 75.1 67 53.7
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.5e-12 75.1 71 52.1
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.5e-12 75.1 71 52.1
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 5.6e-12 73.9 70 47.1
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 7.4e-12 73.6 70 48.6
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 9.6e-12 73.2 63 52.4
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-11 72.8 70 47.1
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 2.1e-11 72.0 68 52.9
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.8e-11 71.6 52 69.2
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.8e-11 71.6 67 53.7
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 6.2e-11 70.5 68 48.5
PGSC0003DMG400045522 Solanum tuberosum HOM05D003617 ORTHO05D010478 6.2e-11 70.5 69 47.8
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 4.0e-10 67.8 64 54.7
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.0e-10 67.8 34 85.3
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 5.3e-10 67.4 68 50.0
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 6.9e-10 67.0 65 52.3
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 2.0e-09 65.5 64 53.1
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 4.5e-09 64.3 64 53.1
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.5e-09 64.3 67 50.7
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-08 62.8 60 55.0
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.7e-08 62.4 55 54.5
Nitab4.5_0006852g0060 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.7e-08 62.4 34 79.4
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 3.8e-08 61.2 62 53.2
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.2e-07 58.2 62 48.4
Nitab4.5_0018035g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.5e-07 57.4 68 44.1
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.2e-06 56.2 39 64.1
CAN.G474.5 Capsicum annuum HOM05D001802 ORTHO05D010478 2.1e-06 55.5 48 58.3
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.0e-06 53.9 30 83.3


User provided reference genes

Program Settings