Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005502g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-48 195.3 97 100.0
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-27 126.3 114 63.2
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-24 114.0 116 53.4
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-21 104.8 133 50.4
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-20 102.8 116 52.6
Nitab4.5_0000261g0180 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.4e-20 100.5 122 52.5
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-19 99.0 113 54.0
Nitab4.5_0008994g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.2e-19 97.4 131 49.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.1e-18 96.7 113 48.7
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-18 95.5 100 55.0
Peaxi162Scf00032g00919 Petunia axillaris HOM05D001309 ORTHO05D000385 6.9e-18 94.0 117 46.2
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.2e-17 93.2 115 48.7
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-17 93.2 107 51.4
Nitab4.5_0008635g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-17 93.2 107 51.4
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-17 92.8 121 50.4
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-17 91.7 121 46.3
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-17 91.3 122 47.5
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-17 90.5 109 51.4
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-16 89.4 133 45.1
Nitab4.5_0010256g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-16 89.4 106 51.9
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-16 89.0 137 43.1
Nitab4.5_0000577g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-16 88.6 92 52.2
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 8.4e-16 87.0 102 49.0
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-15 86.7 131 45.8
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-15 86.7 134 43.3
Nitab4.5_0003339g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-15 85.1 89 51.7
Nitab4.5_0001199g0080 Nicotiana tabacum HOM05D001309 ORTHO05D284353 5.5e-15 84.3 45 91.1
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-14 82.4 99 50.5
Nitab4.5_0001903g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-14 81.3 86 57.0
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-14 81.3 77 61.0
PGSC0003DMG400046524 Solanum tuberosum HOM05D001309 ORTHO05D000385 6.0e-14 80.9 101 47.5
Nitab4.5_0008766g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-14 80.5 106 48.1
Nitab4.5_0005558g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-13 80.1 43 86.0
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-13 79.7 95 49.5
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-13 77.8 123 41.5
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.7e-13 77.0 111 45.9
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-11 72.8 44 75.0
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-11 72.0 43 76.7
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-11 71.6 43 76.7
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-11 71.2 114 42.1
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.3e-11 70.9 44 72.7
Nitab4.5_0007229g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.2e-11 70.5 44 70.5
Nitab4.5_0026778g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.2e-11 70.5 38 89.5
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-10 70.1 43 74.4
Nitab4.5_0001199g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-10 69.7 43 81.4
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.4e-10 69.7 42 76.2
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-10 69.3 43 74.4
Nitab4.5_0005765g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-10 69.3 43 72.1
Nitab4.5_0002459g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-10 68.9 83 51.8
Peaxi162Scf00524g00007 Petunia axillaris HOM05D001309 ORTHO05D000385 2.4e-10 68.9 104 39.4
Nitab4.5_0000440g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-10 68.6 43 69.8
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-10 68.6 43 76.7
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-10 68.2 44 70.5
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.3e-10 67.8 43 67.4
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.9e-10 67.4 43 76.7
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.9e-10 67.4 39 82.1
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.9e-10 67.4 44 65.9
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.9e-10 67.4 43 72.1
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-09 66.2 38 78.9
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-09 64.7 48 64.6
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-09 64.7 44 68.2
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-09 63.9 42 66.7
Nitab4.5_0015781g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-09 63.9 42 69.0
Nitab4.5_0001130g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-08 63.5 44 63.6
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-08 60.8 111 40.5
Nitab4.5_0006526g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-07 60.1 45 57.8
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-07 59.3 44 59.1
Nitab4.5_0008584g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-07 57.4 44 56.8
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 7.2e-07 57.4 34 73.5
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 56.6 38 68.4
Nitab4.5_0004688g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-06 55.5 72 41.7
Nitab4.5_0000928g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.1e-06 54.3 36 66.7
Nitab4.5_0003433g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-06 53.9 85 44.7


User provided reference genes

Program Settings