Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 3.3e-98 361.7 178 100.0
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 5.0e-30 135.2 117 65.0
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.1e-29 134.0 116 64.7
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.1e-29 134.0 116 64.7
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.4e-29 133.7 116 65.5
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.0e-27 127.5 117 63.2
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 2.1e-20 103.2 108 53.7
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 7.9e-20 101.3 97 56.7
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.1e-18 97.4 108 51.9
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.5e-18 97.1 60 80.0
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 2.6e-18 96.3 109 54.1
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.6e-18 96.3 56 78.6
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.6e-18 96.3 60 78.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.6e-18 96.3 72 69.4
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 3.3e-18 95.9 55 81.8
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 5.7e-18 95.1 110 51.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 7.4e-18 94.7 60 75.0
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 7.4e-18 94.7 55 81.8
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.3e-17 94.0 102 53.9
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.3e-17 94.0 101 52.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.3e-17 94.0 55 78.2
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.3e-17 94.0 97 54.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.3e-17 94.0 55 80.0
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.7e-17 93.6 71 64.8
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 2.2e-17 93.2 55 78.2
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.2e-17 93.2 55 78.2
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.2e-17 93.2 55 80.0
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.8e-17 92.8 110 50.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 2.8e-17 92.8 55 78.2
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 2.8e-17 92.8 55 76.4
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.8e-17 92.8 55 78.2
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.7e-17 92.4 54 79.6
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 4.8e-17 92.0 55 76.4
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 4.8e-17 92.0 54 79.6
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 6.3e-17 91.7 55 81.8
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 6.3e-17 91.7 104 49.0
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 6.3e-17 91.7 60 73.3
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 6.3e-17 91.7 72 61.1
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 6.3e-17 91.7 59 72.9
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 6.3e-17 91.7 67 67.2
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 6.3e-17 91.7 67 64.2
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.1e-16 90.9 55 74.5
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.1e-16 90.9 53 79.2
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.4e-16 90.5 55 70.9
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.4e-16 90.5 55 76.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.8e-16 90.1 53 79.2
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 1.8e-16 90.1 67 65.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.8e-16 90.1 53 73.6
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 1.8e-16 90.1 55 78.2
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.8e-16 90.1 110 50.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 1.8e-16 90.1 55 76.4
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.8e-16 90.1 67 64.2
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.4e-16 89.7 55 76.4
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 3.1e-16 89.4 55 72.7
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 3.1e-16 89.4 53 73.6
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 3.1e-16 89.4 55 74.5
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 4.1e-16 89.0 67 64.2
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 4.1e-16 89.0 55 76.4
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 4.1e-16 89.0 55 74.5
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 6.9e-16 88.2 55 74.5
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 6.9e-16 88.2 55 74.5
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 6.9e-16 88.2 55 74.5
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 6.9e-16 88.2 55 72.7
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 9.1e-16 87.8 55 72.7
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 9.1e-16 87.8 55 72.7
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 9.1e-16 87.8 55 72.7
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 9.1e-16 87.8 55 72.7
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 9.1e-16 87.8 111 45.9
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.2e-15 87.4 55 70.9
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.2e-15 87.4 55 70.9
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.2e-15 87.4 55 74.5
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 1.2e-15 87.4 67 65.7
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.5e-15 87.0 67 62.7
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 72.7
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.5e-15 87.0 55 74.5
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 2.6e-15 86.3 55 78.2
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.6e-15 86.3 55 70.9
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 3.4e-15 85.9 55 72.7
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 4.5e-15 85.5 55 72.7
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.7e-14 83.6 67 62.7
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.2e-14 83.2 72 58.3
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 2.9e-14 82.8 56 69.6
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 2.9e-14 82.8 97 47.4
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 3.8e-14 82.4 55 69.1
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.4e-13 80.5 55 67.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.4e-13 80.5 98 51.0
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.2e-12 77.4 55 67.3
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.2e-12 77.4 53 67.9
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.6e-12 77.0 55 67.3
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 1.0e-11 74.3 61 62.3
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.1e-08 62.8 42 73.8
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 3.1e-08 62.8 66 47.0
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 3.1e-08 62.8 40 75.0
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.6e-07 60.5 36 80.6
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 7.7e-07 58.2 63 49.2


User provided reference genes

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