Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-55 218.8 107 100.0
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.1e-44 180.3 109 80.7
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-36 154.5 109 71.6
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.4e-34 147.9 109 72.5
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 8.7e-30 133.7 108 64.8
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-24 114.4 109 59.6
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.0e-19 98.2 64 81.2
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.3e-16 87.0 105 45.7
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-15 86.3 109 48.6
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-15 85.5 105 43.8
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-15 85.1 105 44.8
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-15 84.7 102 45.1
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 4.6e-15 84.7 109 39.4
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.9e-15 84.0 109 39.4
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 7.9e-15 84.0 109 39.4
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-14 83.6 105 43.8
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-14 82.8 105 43.8
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-14 82.8 105 42.9
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-14 82.4 90 45.6
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-14 82.0 97 46.4
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-14 82.0 99 44.4
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-14 82.0 95 44.2
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-14 81.6 105 41.9
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-14 80.9 102 44.1
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-14 80.9 97 43.3
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-14 80.9 97 41.2
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-13 79.7 105 40.0
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-13 79.7 105 43.8
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-13 79.3 89 44.9
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-13 79.3 97 45.4
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-12 75.5 97 42.3
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-11 73.2 105 41.9
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-11 72.0 105 40.0
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.9e-11 70.9 97 44.3
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.0e-11 70.5 95 35.8
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.0e-11 70.5 100 41.0
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-10 68.6 99 37.4
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-10 68.6 80 41.2
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.5e-10 68.2 99 37.4
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-09 66.2 99 36.4
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-09 66.2 92 33.7
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-09 65.5 81 40.7
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-09 65.5 95 35.8
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-09 65.1 99 36.4
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-09 65.1 89 42.7
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.9e-09 64.7 101 37.6
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-09 64.7 83 36.1
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-09 64.3 83 33.7
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.5e-09 64.3 99 33.3
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.5e-09 64.3 105 35.2
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-09 64.3 87 35.6
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-08 63.2 95 34.7
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-08 63.2 81 39.5
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-08 62.8 93 35.5
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-08 62.8 99 34.3
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-08 62.8 89 39.3
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-08 62.4 101 31.7
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 2.5e-08 62.4 101 31.7
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 2.5e-08 62.4 101 31.7
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-08 62.4 101 31.7
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-08 62.0 87 33.3
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 4.2e-08 61.6 95 32.6
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 4.2e-08 61.6 95 32.6
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-08 61.6 101 31.7
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 4.2e-08 61.6 101 30.7
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 5.5e-08 61.2 105 31.4
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.5e-08 61.2 95 34.7
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-08 60.8 79 34.2
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.3e-08 60.5 81 38.3
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 9.3e-08 60.5 101 30.7
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-07 60.1 105 31.4
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-07 60.1 105 31.4
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-07 60.1 105 31.4
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-07 60.1 105 31.4
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.6e-07 59.7 90 33.3
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-07 59.7 66 43.9
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-07 59.7 100 37.0
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-07 59.7 101 30.7
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-07 59.7 101 30.7
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-07 58.5 101 29.7
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 4.6e-07 58.2 95 31.6
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-07 58.2 93 33.3
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-06 57.0 59 45.8
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-06 57.0 92 33.7
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-06 56.6 99 34.3
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 2.3e-06 55.8 102 36.3
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-06 55.8 63 38.1
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-06 55.8 53 43.4
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-06 55.5 82 35.4
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-06 55.5 98 30.6
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-06 55.1 59 44.1
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-06 54.7 63 38.1
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 5.1e-06 54.7 87 34.5
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-06 54.3 62 38.7
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 6.7e-06 54.3 83 30.1
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 6.7e-06 54.3 51 41.2


User provided reference genes

Program Settings