Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 4.5e-233 810.8 394 100.0
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.4e-226 789.3 394 97.2
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.4e-223 779.2 394 95.7
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 8.5e-200 700.3 402 86.8
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 2.4e-194 682.2 366 90.7
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 5.9e-193 677.6 395 84.3
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 1.1e-191 673.3 366 89.9
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 1.4e-178 629.8 402 80.1
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 1.0e-168 597.0 404 73.0
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 5.1e-160 568.2 396 69.2
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 4.3e-159 565.1 401 68.6
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 1.2e-158 563.5 412 67.5
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 2.1e-158 562.8 405 69.1
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 2.8e-158 562.4 403 69.7
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 4.7e-158 561.6 397 69.5
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 1.4e-157 560.1 370 73.2
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 1.8e-157 559.7 402 67.2
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 4.0e-157 558.5 401 69.3
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 1.2e-156 557.0 402 67.7
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 1.5e-156 556.6 386 68.9
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 2.6e-156 555.8 387 70.8
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 2.6e-156 555.8 377 70.3
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 3.4e-156 555.4 370 73.0
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 1.3e-155 553.5 395 70.1
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 1.7e-155 553.1 412 67.0
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 1.7e-155 553.1 403 68.5
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.2e-155 552.7 401 69.1
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 3.8e-155 552.0 403 67.2
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 3.8e-155 552.0 397 67.0
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 3.8e-155 552.0 395 70.4
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 4.9e-155 551.6 399 68.4
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 8.4e-155 550.8 403 67.0
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 8.4e-155 550.8 405 66.7
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.1e-154 550.4 397 66.5
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.4e-154 550.1 397 66.8
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 1.4e-154 550.1 403 67.7
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 1.9e-154 549.7 403 68.5
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.2e-154 548.9 403 67.0
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 3.2e-154 548.9 400 67.5
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 7.1e-154 547.7 403 67.0
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.1e-153 546.2 370 71.4
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 3.5e-153 545.4 396 66.9
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 4.6e-153 545.0 403 67.0
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 6.0e-153 544.7 425 64.7
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 7.8e-153 544.3 385 67.8
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 1.3e-152 543.5 376 68.9
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 2.3e-152 542.7 406 68.0
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 8.7e-152 540.8 385 67.3
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 8.7e-152 540.8 381 68.2
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 8.7e-152 540.8 381 68.2
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 1.1e-151 540.4 406 67.7
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 2.5e-151 539.3 384 68.2
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 2.5e-151 539.3 384 68.2
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 7.3e-151 537.7 401 65.3
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 7.3e-151 537.7 408 65.7
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 9.6e-151 537.3 396 66.7
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 1.3e-150 537.0 382 68.1
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 1.6e-150 536.6 401 65.6
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 2.1e-150 536.2 396 65.4
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 2.8e-150 535.8 389 66.1
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 8.1e-150 534.3 398 66.8
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 8.1e-150 534.3 379 67.5
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 1.1e-149 533.9 384 66.7
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 1.1e-149 533.9 371 70.9
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 2.4e-149 532.7 398 66.6
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 3.1e-149 532.3 380 66.6
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 4.0e-149 531.9 397 65.0
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 4.0e-149 531.9 384 67.4
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 1.5e-148 530.0 380 67.1
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.5e-148 530.0 396 64.9
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 2.0e-148 529.6 380 67.1
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 4.5e-148 528.5 386 66.8
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 4.5e-148 528.5 384 68.8
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 2.2e-147 526.2 379 67.0
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 2.2e-147 526.2 409 64.8
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 4.9e-147 525.0 390 66.2
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 6.4e-147 524.6 402 65.4
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 3.2e-146 522.3 435 61.6
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 5.4e-146 521.5 379 67.5
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 1.2e-145 520.4 379 66.5
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 4.6e-145 518.5 379 65.4
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 4.6e-145 518.5 376 66.8
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-144 516.9 380 66.3
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 3.0e-144 515.8 395 64.8
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 5.1e-144 515.0 383 65.8
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 6.7e-144 514.6 373 66.5
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 6.7e-144 514.6 400 66.2
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 2.5e-143 512.7 397 65.2
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 4.3e-143 511.9 377 66.8
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 2.4e-141 506.1 390 64.6
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 2.6e-140 502.7 380 64.2
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 9.9e-140 500.7 371 66.8
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 4.6e-137 491.9 366 64.8
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 1.3e-136 490.3 399 61.7
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 1.5e-135 486.9 378 64.0
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 1.3e-134 483.8 378 61.6
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 1.6e-134 483.4 353 67.1
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 2.1e-134 483.0 443 56.4
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 5.3e-133 478.4 373 63.5
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 3.4e-132 475.7 335 69.0
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 7.6e-132 474.6 394 61.7
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 2.9e-131 472.6 385 60.8
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.8e-131 472.2 385 60.8
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 8.7e-128 461.1 384 59.4
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 9.7e-127 457.6 362 62.4
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 9.0e-125 451.1 378 58.7
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 1.0e-123 447.6 384 58.6
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 2.7e-121 439.5 403 57.1
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 1.6e-113 413.7 284 69.7
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 4.7e-113 412.1 376 53.7
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 4.7e-113 412.1 366 53.3
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 1.8e-112 410.2 376 54.5
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 3.9e-112 409.1 294 67.0
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 6.7e-112 408.3 375 55.2
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 8.8e-112 407.9 402 56.0
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 7.4e-111 404.8 291 67.0
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 9.1e-109 397.9 369 53.1
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 2.6e-108 396.4 599 40.7
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 3.4e-108 396.0 352 59.9
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 1.8e-104 383.6 262 69.8
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 3.7e-102 375.9 264 65.9
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 4.1e-101 372.5 360 49.2
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 9.1e-101 371.3 255 68.6
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 3.8e-99 365.9 241 73.0
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 4.2e-98 362.5 271 67.2
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 6.1e-97 358.6 251 66.5
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 1.8e-96 357.1 269 67.3
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.7e-94 350.5 375 50.4
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 6.3e-94 348.6 245 64.9
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 8.2e-94 348.2 244 64.8
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 7.0e-93 345.1 250 66.0
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 2.1e-89 333.6 401 45.9
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.2e-86 323.6 243 65.4
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 4.0e-80 302.8 357 45.4
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 5.7e-79 298.9 192 71.9
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 1.7e-62 244.2 158 74.1
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 8.3e-62 241.9 278 50.0
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 1.0e-51 208.4 231 51.1
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.3e-51 207.2 207 50.7
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 4.4e-47 193.0 132 72.0
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 1.2e-41 174.9 156 55.1
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 5.3e-40 169.5 115 66.1
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 1.4e-37 161.4 131 63.4
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 5.4e-37 159.5 401 33.2
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 3.1e-32 143.7 106 63.2
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 7.6e-31 139.0 392 30.1
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 6.4e-30 136.0 296 32.1
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 3.0e-27 127.1 167 44.3
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 4.0e-24 116.7 97 55.7
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 6.4e-22 109.4 70 64.3
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 9.3e-21 105.5 93 59.1
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 4.6e-20 103.2 380 26.8
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 2.3e-19 100.9 93 57.0
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 2.5e-18 97.4 93 55.9
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 8.2e-17 92.4 76 57.9
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 7.4e-10 69.3 52 61.5
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 1.1e-08 65.5 55 56.4
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 1.5e-07 61.6 52 50.0
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 7.7e-07 59.3 59 54.2
MELO3C035473.2 Cucumis melo HOM05D040713 ORTHO05D005180 1.7e-06 58.2 43 67.4


User provided reference genes

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