Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 7.6e-186 653.7 328 100.0
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 7.2e-184 647.1 328 98.8
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.3e-172 609.8 328 93.0
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 5.0e-169 597.8 328 90.5
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.0e-166 590.1 328 89.3
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 2.8e-164 582.0 328 88.7
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 2.3e-158 562.4 328 85.1
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.4e-155 552.4 328 83.2
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 5.3e-155 551.2 328 83.2
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 9.1e-155 550.4 328 82.9
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 6.5e-153 544.3 303 89.4
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.5e-152 543.1 328 81.1
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 5.5e-152 541.2 330 82.1
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 5.5e-152 541.2 328 81.7
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.3e-150 535.8 328 81.1
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 3.0e-150 535.4 329 80.5
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.2e-149 533.5 328 80.5
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 9.8e-149 530.4 328 79.9
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 4.8e-148 528.1 327 79.2
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 5.5e-144 514.6 328 77.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 9.4e-144 513.8 328 79.0
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 9.4e-144 513.8 328 77.4
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 2.7e-143 512.3 328 77.1
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 6.1e-143 511.1 328 77.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 6.1e-143 511.1 328 79.0
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.8e-142 509.6 328 76.8
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.8e-142 509.6 325 78.2
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 3.0e-142 508.8 328 77.7
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 4.0e-142 508.4 328 76.8
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 8.8e-142 507.3 328 76.8
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 8.8e-142 507.3 328 77.7
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.7e-140 503.1 328 76.5
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 2.8e-140 502.3 328 76.5
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 4.9e-140 501.5 328 76.2
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.1e-139 500.4 328 75.3
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.4e-139 500.0 328 75.9
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 9.2e-139 497.3 328 75.3
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.0e-138 496.1 328 75.9
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.5e-138 495.4 326 75.2
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.5e-138 495.4 325 76.0
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 7.7e-138 494.2 328 75.9
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.3e-137 493.4 328 75.3
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 2.9e-137 492.3 328 74.7
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 2.9e-137 492.3 326 74.5
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 3.8e-137 491.9 328 75.0
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 5.0e-137 491.5 328 75.3
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 5.0e-137 491.5 328 75.3
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 5.0e-137 491.5 328 75.0
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.9e-136 489.6 328 74.7
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.9e-136 489.6 328 74.7
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.9e-136 489.6 329 74.8
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 4.3e-136 488.4 328 72.9
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 9.5e-136 487.3 328 73.8
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 2.8e-135 485.7 328 73.2
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 6.1e-135 484.6 328 73.2
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.4e-134 483.4 330 73.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 6.8e-134 481.1 330 73.0
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.5e-133 479.9 328 71.6
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 2.0e-133 479.6 328 72.0
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 2.6e-133 479.2 328 72.0
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 7.5e-133 477.6 328 72.6
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 9.8e-133 477.2 328 72.3
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.9e-132 475.7 328 71.3
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 3.7e-132 475.3 328 71.0
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 6.4e-132 474.6 328 71.6
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.1e-131 473.8 328 70.7
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 1.4e-131 473.4 328 71.0
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 1.8e-131 473.0 328 71.0
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.8e-131 473.0 328 71.3
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.8e-131 473.0 328 71.3
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 2.4e-131 472.6 328 71.0
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 1.6e-130 469.9 328 71.0
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 3.5e-130 468.8 328 70.4
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.0e-129 467.2 328 71.0
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.7e-129 466.5 326 72.1
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.9e-129 465.3 328 70.1
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 5.0e-129 464.9 328 68.9
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.5e-128 463.4 328 70.7
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 7.3e-128 461.1 328 69.8
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 2.1e-127 459.5 328 69.8
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.9e-123 446.4 303 71.3
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 1.2e-122 443.7 328 66.2
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 4.6e-122 441.8 328 67.4
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 4.6e-122 441.8 328 67.4
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.0e-121 440.7 326 68.4
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.7e-121 439.9 325 65.8
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.6e-119 433.3 328 64.0
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.7e-119 431.8 306 70.9
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.8e-118 429.9 306 71.2
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 6.4e-116 421.4 327 62.7
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.0e-114 414.8 313 68.7
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.0e-113 414.1 333 60.1
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.9e-108 396.0 326 60.4
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.9e-107 393.3 326 60.4
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 6.0e-106 388.3 265 72.8
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 2.3e-105 386.3 319 61.8
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 8.6e-105 384.4 328 60.4
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 2.8e-103 379.4 323 57.3
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 1.8e-102 376.7 266 71.1
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 9.9e-101 370.9 325 55.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.1e-99 367.5 335 54.0
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 4.6e-98 362.1 328 56.7
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 6.0e-98 361.7 218 83.5
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 8.7e-97 357.8 301 60.1
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.3e-95 354.0 324 54.6
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.0e-93 346.7 264 68.2
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 7.6e-93 344.7 236 75.0
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 3.1e-86 322.8 295 58.0
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 3.8e-84 315.8 329 49.8
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.9e-82 308.1 313 55.0
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 8.7e-81 304.7 293 55.6
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.5e-77 293.9 227 64.8
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 2.5e-59 233.4 305 46.6
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.8e-47 193.4 121 78.5
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 5.3e-46 189.1 161 61.5
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.6e-34 151.0 115 67.8
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 5.2e-33 146.0 277 35.4
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.3e-31 138.7 102 62.7
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 5.9e-29 132.5 95 62.1
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 2.5e-27 127.1 375 30.4
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 3.2e-27 126.7 124 55.6
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-24 118.2 102 57.8
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 7.5e-24 115.5 62 85.5
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 6.3e-23 112.5 72 75.0
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.6e-21 107.8 337 26.1
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 9.2e-14 82.0 62 61.3


User provided reference genes

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