Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 1.3e-126 456.4 230 100.0
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 2.3e-104 382.5 233 85.8
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 3.9e-27 125.9 240 38.3
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.9e-26 123.6 224 36.2
Lsat_1_v5_gn_2_113841 Lactuca sativa HOM05D011460 ORTHO05D010383 2.4e-24 116.7 222 41.4
Peaxi162Scf00254g00044 Petunia axillaris HOM05D011460 ORTHO05D010383 5.8e-23 112.1 223 35.9
DCAR_006457 Daucus carota HOM05D011460 ORTHO05D010383 1.3e-22 110.9 163 44.2
Solyc11g008750.1 Solanum lycopersicum HOM05D011460 ORTHO05D010383 1.4e-21 107.5 188 40.4
MSTRG.27468 Avicennia marina HOM05D011460 ORTHO05D010383 4.2e-21 105.9 229 36.7
Peaxi162Scf00890g00013 Petunia axillaris HOM05D011460 ORTHO05D010383 2.1e-20 103.6 171 40.4
PGSC0003DMG400016243 Solanum tuberosum HOM05D011460 ORTHO05D010383 2.1e-20 103.6 187 39.0
MSTRG.9176 Avicennia marina HOM05D011460 ORTHO05D010383 1.7e-19 100.5 174 42.0
Migut.F01990 Erythranthe guttata HOM05D011460 ORTHO05D010383 6.6e-19 98.6 234 35.0
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 1.3e-17 94.4 229 32.3
Actinidia03033 Actinidia chinensis HOM05D011460 ORTHO05D010383 9.0e-16 88.2 215 35.3
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 9.9e-15 84.7 218 34.4
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 1.3e-14 84.3 217 31.3
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 8.4e-14 81.6 219 31.1
Actinidia26624 Actinidia chinensis HOM05D002163 ORTHO05D002386 9.3e-13 78.2 174 37.9
Actinidia28951 Actinidia chinensis HOM05D011460 ORTHO05D010383 6.0e-12 75.5 184 35.3
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.9e-11 72.8 244 29.5
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.7e-11 72.0 239 28.5
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-10 71.2 215 29.3
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 3.3e-10 69.7 221 28.1
MD07G1177600 Malus domestica HOM05D010935 ORTHO05D010383 5.6e-10 68.9 242 30.6
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 1.6e-09 67.4 215 26.5
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.7e-09 66.2 250 26.8
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.8e-09 65.9 256 29.3
Gohir.D01G117600 Gossypium hirsutum HOM05D010162 ORTHO05D010383 4.8e-09 65.9 198 31.8
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 6.2e-09 65.5 226 29.2
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 6.2e-09 65.5 256 28.9
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.2e-09 65.5 246 27.6
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 8.1e-09 65.1 230 29.6
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 8.1e-09 65.1 221 29.9
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 1.1e-08 64.7 203 31.5
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 1.1e-08 64.7 212 28.8
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.4e-08 64.3 244 28.3
Gorai.002G143100 Gossypium raimondii HOM05D010162 ORTHO05D010383 1.4e-08 64.3 198 31.3
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 1.8e-08 63.9 197 31.5
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.8e-08 63.9 203 30.5
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.4e-08 63.5 255 28.2
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 2.4e-08 63.5 259 25.9
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 3.1e-08 63.2 244 29.1
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.0e-08 62.8 255 27.8
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.0e-08 62.8 204 29.9
COL.COLO4_23723 Corchorus olitorius HOM05D010162 ORTHO05D010383 5.3e-08 62.4 235 30.6
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 5.3e-08 62.4 248 27.8
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 5.3e-08 62.4 227 29.1
Gohir.D13G023650 Gossypium hirsutum HOM05D010162 ORTHO05D010383 6.9e-08 62.0 223 28.7
Gohir.A13G024800 Gossypium hirsutum HOM05D010162 ORTHO05D010383 9.0e-08 61.6 223 29.1
Prupe.2G217000 Prunus persica HOM05D010935 ORTHO05D010383 9.0e-08 61.6 232 28.4
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.2e-07 61.2 195 31.3
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.5e-07 60.8 99 35.4
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.0e-07 60.5 184 29.9
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 2.0e-07 60.5 230 29.1
RcHm_v2.0_Chr1g0363951 Rosa chinensis HOM05D010935 ORTHO05D010383 2.0e-07 60.5 223 28.7
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 2.6e-07 60.1 212 31.1
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 3.4e-07 59.7 180 32.2
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 3.4e-07 59.7 213 29.6
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 3.4e-07 59.7 213 30.0
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 4.5e-07 59.3 213 29.6
Gohir.A13G024900 Gossypium hirsutum HOM05D010162 ORTHO05D010383 4.5e-07 59.3 224 29.5
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 5.8e-07 58.9 236 25.0
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 5.8e-07 58.9 208 29.8
Gorai.013G026500 Gossypium raimondii HOM05D010162 ORTHO05D010383 5.8e-07 58.9 226 28.3
FvH4_7g20010 Fragaria vesca HOM05D010935 ORTHO05D010383 7.6e-07 58.5 213 29.6
Cfa001603 Carpinus fangiana HOM05D010935 ORTHO05D010383 1.0e-06 58.2 210 26.7
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 1.3e-06 57.8 177 27.7
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 1.3e-06 57.8 211 29.4
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 1.3e-06 57.8 230 28.3
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.3e-06 57.8 255 27.8
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 1.7e-06 57.4 217 27.2
Manes.10G043800 Manihot esculenta HOM05D010162 ORTHO05D010383 2.2e-06 57.0 184 28.3
Phvul.007G092400 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 2.9e-06 56.6 216 29.6
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 3.8e-06 56.2 205 27.3
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 4.9e-06 55.8 182 29.1
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 4.9e-06 55.8 282 27.7
VMungo0720G0200 Vigna mungo HOM05D003020 ORTHO05D003226 4.9e-06 55.8 211 28.4
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 6.4e-06 55.5 202 30.7
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 6.4e-06 55.5 165 28.5
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 6.4e-06 55.5 245 27.8
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 8.4e-06 55.1 177 28.8
Sopen11g004530 Solanum pennellii HOM05D011460 ORTHO05D010383 8.4e-06 55.1 79 44.3


User provided reference genes

Program Settings