Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.8e-149 531.2 275 100.0
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.2e-144 516.5 275 96.4
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.3e-117 426.8 269 84.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.3e-117 426.8 270 85.6
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.7e-117 425.2 269 84.4
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.9e-113 412.9 270 84.1
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 3.2e-92 342.4 266 69.2
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.6e-91 340.1 243 76.1
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 2.3e-90 336.3 270 70.0
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 8.6e-90 334.3 276 68.1
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 8.6e-90 334.3 276 68.1
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 8.6e-90 334.3 279 68.8
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.1e-89 334.0 278 68.0
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.1e-89 334.0 272 69.9
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.9e-89 333.2 243 75.3
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 5.6e-89 331.6 243 74.9
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.2e-88 330.5 271 67.5
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.2e-88 330.5 269 68.0
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.6e-88 330.1 234 73.1
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.6e-88 330.1 268 69.8
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.6e-88 330.1 200 84.0
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 4.7e-88 328.6 291 64.3
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 6.2e-88 328.2 209 79.4
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 6.2e-88 328.2 278 66.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 8.1e-88 327.8 209 81.3
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.1e-87 327.4 270 67.8
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.8e-87 326.6 272 68.8
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 2.3e-87 326.2 271 69.7
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.1e-87 325.9 268 68.3
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 4.0e-87 325.5 238 72.7
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 5.2e-87 325.1 215 79.5
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 6.8e-87 324.7 268 66.0
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 6.8e-87 324.7 195 84.6
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.2e-86 323.9 269 67.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.5e-86 323.6 288 64.9
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.0e-86 323.2 269 67.7
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.0e-86 323.2 209 81.3
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.6e-86 322.8 219 76.3
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 2.6e-86 322.8 272 65.4
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 3.4e-86 322.4 280 66.8
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 4.4e-86 322.0 272 69.1
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 4.4e-86 322.0 271 67.9
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.8e-86 321.6 267 66.7
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 5.8e-86 321.6 268 69.8
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 7.5e-86 321.2 274 67.2
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 7.5e-86 321.2 276 66.3
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.3e-85 320.5 267 68.5
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.2e-85 319.7 271 67.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.9e-85 319.3 280 67.5
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 2.9e-85 319.3 279 67.4
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 3.7e-85 318.9 282 67.4
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 4.9e-85 318.5 281 66.2
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 1.1e-84 317.4 208 80.3
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.1e-84 317.4 281 65.8
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.4e-84 317.0 275 67.3
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.9e-84 316.6 212 80.2
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.9e-84 316.6 212 80.2
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.2e-84 315.8 271 65.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 3.2e-84 315.8 262 65.3
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.2e-84 315.8 235 71.5
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.2e-84 315.8 269 67.3
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 4.1e-84 315.5 187 84.5
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 4.1e-84 315.5 199 82.9
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 9.2e-84 314.3 275 65.8
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.2e-83 313.9 276 65.6
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.7e-83 312.8 268 66.4
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 4.6e-83 312.0 267 65.5
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 4.6e-83 312.0 199 80.9
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 4.6e-83 312.0 195 84.1
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 6.0e-83 311.6 210 76.2
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 6.0e-83 311.6 271 64.9
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 7.8e-83 311.2 253 67.6
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 7.8e-83 311.2 291 63.2
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 7.8e-83 311.2 269 65.1
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.0e-82 310.8 271 64.6
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.3e-82 310.5 269 64.3
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.3e-82 310.5 188 83.5
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.3e-82 309.7 268 65.7
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 2.3e-82 309.7 188 84.0
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 3.0e-82 309.3 267 65.2
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 3.0e-82 309.3 267 65.2
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.0e-82 309.3 243 70.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 3.0e-82 309.3 271 64.9
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.9e-82 308.9 270 64.8
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 3.9e-82 308.9 225 72.9
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.1e-81 307.4 269 63.6
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 1.9e-81 306.6 270 64.1
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 3.3e-81 305.8 267 64.4
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.3e-81 305.8 189 81.5
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.6e-80 303.5 197 80.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 2.3e-79 299.7 202 79.2
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 8.9e-79 297.7 196 76.5
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.6e-78 296.2 257 64.2
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.6e-78 296.2 194 76.3
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 5.8e-78 295.0 269 63.9
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 7.6e-78 294.7 196 77.6
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.2e-77 293.1 196 77.6
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 4.9e-77 292.0 189 78.3
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.5e-73 280.4 276 60.9
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 7.3e-73 278.1 268 60.4
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 4.4e-70 268.9 219 62.6
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.9e-68 263.5 194 73.2
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 5.4e-68 261.9 191 66.5
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 7.8e-67 258.1 209 62.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 6.6e-66 255.0 234 63.7
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.4e-63 247.3 223 57.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 9.3e-60 234.6 181 72.9
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 9.9e-54 214.5 208 62.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 8.4e-53 211.5 219 57.1
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.7e-50 201.4 137 77.4
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.9e-49 200.3 110 90.9
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.3e-48 197.6 213 49.3
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 7.6e-46 188.3 206 52.9
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 4.9e-45 185.7 148 66.9
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 4.9e-45 185.7 185 51.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.9e-42 176.0 110 74.5
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.0e-37 161.4 188 45.7
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.3e-32 144.4 129 65.9
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.4e-22 109.8 156 47.4
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.1e-15 88.2 74 68.9
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 2.2e-13 80.5 49 77.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 8.5e-13 78.6 96 55.2
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 4.4e-09 66.2 44 77.3
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.3e-08 64.7 44 63.6
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.6e-06 57.8 68 55.9


User provided reference genes

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