Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 4.1e-184 647.9 317 100.0
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.0e-179 633.3 317 97.5
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 1.2e-164 583.2 317 90.9
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.7e-161 572.8 317 89.3
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 6.3e-161 570.9 317 89.6
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 1.2e-159 566.6 317 89.6
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.0e-126 454.9 318 73.3
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.5e-125 453.4 319 73.4
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.3e-125 452.2 318 73.0
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.3e-125 451.1 318 73.6
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.2e-124 450.3 319 74.3
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 2.1e-124 449.5 322 72.7
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 4.7e-124 448.4 315 72.7
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 1.0e-123 447.2 322 72.4
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.2e-123 444.9 318 72.6
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.2e-121 439.5 321 71.3
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 6.4e-121 438.0 319 72.7
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.4e-120 436.8 319 70.8
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.9e-120 436.4 317 71.0
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 7.0e-120 434.5 317 71.3
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 9.2e-120 434.1 320 70.0
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.2e-119 433.7 320 69.7
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.0e-119 433.0 318 69.2
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 6.0e-119 431.4 324 68.2
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 7.8e-119 431.0 317 70.0
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.7e-118 429.9 316 69.6
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.5e-117 426.8 319 69.9
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.2e-116 423.7 315 71.1
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 6.2e-116 421.4 337 66.8
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 8.9e-115 417.5 317 68.5
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.0e-114 416.4 316 68.0
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.4e-114 415.6 316 68.0
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 7.5e-114 414.5 327 66.4
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 3.7e-113 412.1 320 66.9
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.9e-112 409.8 313 69.0
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 7.1e-112 407.9 331 66.5
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 7.1e-112 407.9 317 65.6
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.1e-111 406.4 315 67.9
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 3.5e-111 405.6 317 66.2
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-110 402.9 317 68.1
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-109 400.2 317 68.5
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 2.5e-109 399.4 320 66.6
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.3e-109 398.7 322 65.8
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 7.3e-109 397.9 319 64.9
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 9.5e-109 397.5 324 64.2
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.6e-108 396.7 319 65.8
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 6.2e-108 394.8 320 65.0
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 8.1e-108 394.4 331 64.4
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 1.8e-107 393.3 281 72.6
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 5.2e-107 391.7 328 63.7
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 5.2e-107 391.7 323 62.8
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.5e-106 390.2 323 64.4
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 3.8e-105 385.6 307 65.8
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.2e-104 382.5 306 67.0
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.5e-103 379.0 317 64.0
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.3e-102 377.1 361 59.3
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 3.0e-102 375.9 327 62.7
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 7.3e-101 371.3 286 67.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 9.6e-101 370.9 292 66.1
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 2.1e-100 369.8 325 61.2
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 3.6e-100 369.0 287 66.9
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 4.7e-100 368.6 320 60.6
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 6.2e-100 368.2 298 64.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.1e-99 367.5 286 66.4
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 4.0e-99 365.5 318 61.9
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 3.4e-98 362.5 320 61.6
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 4.4e-98 362.1 332 60.5
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 5.1e-94 348.6 313 60.7
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-93 347.1 316 61.7
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 2.5e-93 346.3 287 64.5
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 3.6e-92 342.4 353 54.4
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 2.4e-91 339.7 317 58.0
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 4.0e-91 339.0 264 65.9
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 4.5e-90 335.5 283 63.3
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 4.9e-89 332.0 218 77.5
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.1e-85 320.9 324 55.2
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-83 314.3 265 64.5
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 1.1e-83 314.3 231 68.4
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.4e-83 313.9 305 56.4
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 4.0e-83 312.4 218 72.5
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 6.9e-83 311.6 319 55.5
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 2.2e-81 306.6 315 53.0
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-78 296.6 195 73.8
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 6.2e-76 288.5 309 55.3
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.9e-75 285.0 317 54.3
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.2e-74 284.3 317 54.3
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.6e-74 283.1 283 58.0
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 3.4e-74 282.7 224 67.9
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.6e-74 281.6 318 55.3
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-71 274.2 304 53.6
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.0e-70 269.6 216 68.1
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.2e-68 261.5 180 72.2
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 1.8e-67 260.4 286 52.8
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 5.0e-65 252.3 183 69.4
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.0e-58 230.3 356 41.9
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.2e-56 223.0 176 66.5
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 4.4e-53 212.6 128 79.7
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 1.7e-52 210.7 167 67.7
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.2e-50 204.5 279 41.9
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.5e-48 196.8 179 55.9
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 2.5e-48 196.8 272 40.8
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.4e-38 164.5 304 38.8
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 4.4e-29 132.9 138 52.9
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.1e-24 118.2 225 36.9
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 5.7e-21 105.9 100 56.0
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 2.3e-17 94.0 109 52.3
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 2.6e-13 80.5 260 25.4
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 5.7e-13 79.3 53 69.8
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.0e-09 68.6 73 56.2
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 9.5e-08 62.0 40 70.0
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.8e-06 55.8 95 36.8


User provided reference genes

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