Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 6.5e-91 337.4 177 100.0
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.9e-69 266.2 155 92.3
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 4.9e-54 214.9 157 77.7
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 8.3e-54 214.2 155 77.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 2.2e-46 189.5 122 82.8
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 2.3e-43 179.5 155 68.4
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.4e-37 159.5 152 67.1
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.4e-37 159.5 152 67.1
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.2e-36 157.1 157 65.0
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 6.0e-36 154.8 154 64.3
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.0e-35 154.1 142 69.0
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 1.3e-35 153.7 155 60.6
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 6.6e-35 151.4 153 64.1
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 6.6e-35 151.4 147 64.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 3.3e-34 149.1 150 62.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 5.6e-34 148.3 152 60.5
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.6e-34 148.3 152 60.5
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 7.3e-34 147.9 99 82.8
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 9.6e-34 147.5 155 62.6
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.3e-33 147.1 157 60.5
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.6e-33 146.7 147 61.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.1e-33 146.4 151 59.6
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 2.8e-33 146.0 146 63.0
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.8e-33 146.0 156 63.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.8e-33 146.0 134 62.7
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.6e-33 145.6 149 63.1
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 4.8e-33 145.2 100 65.0
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 8.1e-33 144.4 100 80.0
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 8.1e-33 144.4 156 57.7
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 8.1e-33 144.4 146 61.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.1e-32 144.1 154 59.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-32 143.7 148 62.8
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.4e-32 143.7 151 62.9
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.8e-32 143.3 146 63.7
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 3.1e-32 142.5 146 58.9
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 3.1e-32 142.5 146 63.7
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 3.1e-32 142.5 146 63.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 3.1e-32 142.5 104 76.9
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.1e-32 142.5 104 76.9
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 4.0e-32 142.1 148 60.8
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 4.0e-32 142.1 148 60.8
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 4.0e-32 142.1 147 59.9
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 4.0e-32 142.1 149 61.7
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 6.9e-32 141.4 106 73.6
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 6.9e-32 141.4 148 60.8
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 9.0e-32 141.0 143 60.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.5e-31 140.2 149 59.1
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.5e-31 140.2 99 82.8
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.5e-31 140.2 104 76.0
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 2.0e-31 139.8 145 62.8
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.0e-31 139.8 105 71.4
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.6e-31 139.4 104 76.0
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 3.4e-31 139.0 97 79.4
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 3.4e-31 139.0 100 80.0
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 4.5e-31 138.7 146 58.2
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 4.5e-31 138.7 146 62.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 4.5e-31 138.7 126 58.7
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 4.5e-31 138.7 155 57.4
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 5.8e-31 138.3 144 59.7
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 5.8e-31 138.3 147 60.5
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 9.9e-31 137.5 144 59.7
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 9.9e-31 137.5 100 76.0
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.7e-30 136.7 149 59.7
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.9e-30 136.0 143 58.7
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 2.9e-30 136.0 124 66.1
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 3.8e-30 135.6 144 59.0
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.9e-30 135.2 111 71.2
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 4.9e-30 135.2 128 61.7
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 4.9e-30 135.2 136 60.3
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 4.9e-30 135.2 147 58.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 6.4e-30 134.8 82 89.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.4e-30 134.4 103 73.8
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.4e-30 134.4 103 73.8
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 8.4e-30 134.4 107 71.0
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.1e-29 134.0 99 77.8
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.1e-29 134.0 143 60.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.1e-29 134.0 104 73.1
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.9e-29 133.3 95 74.7
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 4.2e-29 132.1 96 75.0
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 5.4e-29 131.7 147 57.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 7.1e-29 131.3 137 56.9
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 7.1e-29 131.3 128 60.9
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 9.3e-29 131.0 100 76.0
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 2.1e-28 129.8 150 57.3
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 3.5e-28 129.0 111 69.4
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.3e-27 127.1 148 57.4
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.3e-27 126.3 96 74.0
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 2.3e-27 126.3 123 61.8
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 2.3e-27 126.3 102 71.6
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.0e-27 125.9 95 71.6
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.0e-27 125.9 91 75.8
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 6.7e-27 124.8 150 54.0
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.5e-26 123.6 98 71.4
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 9.6e-26 120.9 98 74.5
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 9.6e-26 120.9 77 67.5
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 8.1e-25 117.9 179 49.7
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 5.3e-24 115.2 97 68.0
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 6.9e-24 114.8 92 68.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 9.0e-24 114.4 94 66.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.4e-23 112.5 89 73.0
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.9e-22 109.4 112 57.1
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.9e-22 108.6 77 79.2
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 8.4e-22 107.8 83 71.1
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.5e-21 106.3 73 82.2
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.9e-11 72.4 93 45.2


User provided reference genes

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