Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.8e-157 557.8 276 100.0
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.6e-144 515.0 277 93.5
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 2.4e-92 342.8 310 64.2
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.3e-90 337.0 309 63.4
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 6.6e-90 334.7 308 63.3
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 3.8e-85 318.9 294 65.0
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 1.7e-82 310.1 310 60.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.5e-81 307.0 291 61.2
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.8e-79 300.1 288 60.4
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.5e-78 297.0 300 57.7
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.5e-78 297.0 284 60.6
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 3.4e-78 295.8 283 60.1
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 9.9e-78 294.3 280 62.5
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.7e-77 293.5 307 56.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.9e-77 292.7 304 58.2
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 8.4e-77 291.2 293 55.6
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.1e-76 290.8 295 59.0
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 2.4e-76 289.7 258 65.9
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 3.2e-76 289.3 283 58.3
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.2e-76 288.9 300 57.3
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 5.4e-76 288.5 303 55.1
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 2.1e-75 286.6 287 55.4
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 7.8e-75 284.6 300 55.7
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 7.8e-75 284.6 302 56.6
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.0e-74 284.3 303 56.4
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.3e-74 283.9 294 58.8
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.7e-74 283.5 278 59.0
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.7e-74 283.5 289 57.1
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 3.0e-74 282.7 296 57.8
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 3.9e-74 282.3 305 58.0
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 8.7e-74 281.2 302 56.3
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 2.1e-72 276.6 291 55.7
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 2.8e-72 276.2 293 56.3
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 4.0e-71 272.3 278 58.3
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 6.9e-71 271.6 295 54.9
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 9.0e-71 271.2 289 54.3
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.5e-70 270.4 297 54.9
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 3.4e-70 269.2 309 52.8
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 5.8e-70 268.5 283 55.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 7.6e-70 268.1 293 54.6
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.3e-69 267.3 306 52.0
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.7e-69 266.9 288 56.2
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.7e-69 266.9 286 55.2
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.7e-69 266.9 294 55.1
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 2.9e-69 266.2 288 56.2
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 2.9e-69 266.2 300 53.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 3.8e-69 265.8 289 55.0
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 4.9e-69 265.4 291 54.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 4.9e-69 265.4 318 50.6
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.9e-69 265.4 284 54.6
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.9e-69 265.4 288 55.9
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 6.4e-69 265.0 294 55.1
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 8.4e-69 264.6 282 55.7
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 8.4e-69 264.6 281 54.1
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 5.4e-68 261.9 284 54.6
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.4e-68 261.9 292 53.8
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 9.3e-68 261.2 296 52.0
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 9.3e-68 261.2 294 52.0
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 2.1e-67 260.0 312 51.0
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 2.7e-67 259.6 311 52.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 4.6e-67 258.8 346 48.8
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 6.0e-67 258.5 310 52.3
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.9e-67 258.1 282 55.3
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.9e-67 258.1 282 55.3
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 7.9e-67 258.1 283 55.5
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 7.9e-67 258.1 305 52.5
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 6.7e-66 255.0 278 54.7
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 8.7e-66 254.6 293 52.2
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 8.7e-66 254.6 327 48.3
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.5e-65 253.8 289 54.0
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 3.7e-64 249.2 275 54.9
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.4e-63 247.3 281 50.5
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.8e-63 246.9 337 46.9
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 4.0e-63 245.7 298 52.7
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.5e-62 243.8 296 50.0
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.0e-62 243.4 288 51.7
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.6e-62 243.0 297 48.8
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 2.6e-62 243.0 332 46.4
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.7e-61 240.4 266 53.8
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 4.2e-60 235.7 272 48.9
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 5.5e-60 235.3 271 52.8
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 5.5e-60 235.3 279 51.3
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 4.6e-59 232.3 379 42.0
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 3.0e-58 229.6 349 43.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 3.0e-58 229.6 310 50.6
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.5e-57 226.5 265 50.2
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 3.7e-56 222.6 140 76.4
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.6e-51 207.2 278 46.8
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.7e-51 206.5 109 85.3
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 3.0e-50 203.0 255 49.0
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 3.3e-49 199.5 109 85.3
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 4.3e-49 199.1 114 79.8
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 1.0e-45 188.0 137 64.2
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.2e-44 181.8 98 90.8
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.2e-43 181.0 98 84.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 4.3e-41 172.6 121 64.5
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 6.3e-40 168.7 293 41.6
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 2.4e-39 166.8 98 78.6
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 2.6e-38 163.3 94 78.7
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 3.8e-37 159.5 231 47.2
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.4e-36 157.5 124 58.9
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.4e-34 151.0 98 71.4
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.1e-33 147.9 98 74.5
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.2e-30 137.9 88 73.9
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 4.7e-27 125.9 209 46.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.3e-24 117.9 219 39.7
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.3e-24 117.9 184 47.3
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 2.5e-20 103.6 194 40.2
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 5.5e-20 102.4 196 39.8
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.6e-11 74.3 42 81.0
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 6.1e-11 72.4 241 34.0
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 1.4e-10 71.2 41 75.6
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 1.2e-09 68.2 97 42.3
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.5e-09 67.8 97 42.3
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.5e-09 67.8 97 42.3
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 2.6e-09 67.0 97 42.3
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.3e-08 64.7 176 33.5
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 3.7e-08 63.2 44 63.6
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.4e-07 59.3 185 32.4
SMO230G0120 Selaginella moellendorffii HOM05D040121 ORTHO05D007352 3.5e-06 56.6 184 28.3
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.5e-06 56.2 180 31.7


User provided reference genes

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