Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.2e-213 745.3 376 100.0
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.6e-153 545.8 325 88.6
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 9.8e-137 490.7 324 79.9
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 2.9e-136 489.2 324 80.2
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 6.4e-128 461.5 321 76.0
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.9e-116 423.3 238 90.3
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 4.9e-104 382.1 297 67.3
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 1.9e-103 380.2 292 66.8
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 3.2e-103 379.4 318 63.5
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 1.2e-102 377.5 307 65.5
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 6.0e-102 375.2 284 66.9
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 7.3e-100 368.2 199 89.4
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 1.6e-99 367.1 288 65.6
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 1.8e-98 363.6 307 62.2
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 3.1e-98 362.8 289 64.0
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 9.0e-98 361.3 294 62.6
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 9.0e-98 361.3 288 63.9
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.5e-97 360.5 328 60.1
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 7.6e-97 358.2 326 59.2
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 7.6e-97 358.2 348 55.5
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 9.9e-97 357.8 317 59.9
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 1.3e-96 357.5 326 59.2
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 4.9e-96 355.5 319 59.2
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 1.1e-95 354.4 317 60.6
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.1e-95 354.4 326 58.6
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 1.4e-95 354.0 291 63.2
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 1.9e-95 353.6 325 60.3
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 1.9e-95 353.6 325 60.3
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 4.2e-95 352.4 288 62.8
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 4.2e-95 352.4 307 61.2
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 5.5e-95 352.1 289 63.3
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 7.1e-95 351.7 288 62.2
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 2.1e-94 350.1 317 61.2
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 3.5e-94 349.4 327 59.9
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 4.6e-94 349.0 317 59.6
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 7.9e-94 348.2 323 57.0
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 7.9e-94 348.2 294 62.2
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 1.3e-93 347.4 292 62.3
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 1.3e-93 347.4 288 62.2
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 2.3e-93 346.7 299 61.9
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 2.3e-93 346.7 288 61.8
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 3.0e-93 346.3 318 57.9
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 3.9e-93 345.9 286 64.7
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 5.1e-93 345.5 307 59.3
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 6.7e-93 345.1 321 60.4
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 5.6e-92 342.0 326 61.0
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 7.4e-92 341.7 299 60.9
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.6e-91 340.5 297 61.6
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 2.8e-91 339.7 289 61.9
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 3.7e-91 339.3 282 63.5
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 3.7e-91 339.3 306 58.5
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 4.8e-91 339.0 283 62.2
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 4.8e-91 339.0 338 55.9
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 1.4e-90 337.4 291 62.5
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.8e-90 337.0 289 61.6
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 2.4e-90 336.7 310 55.8
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 2.4e-90 336.7 310 56.1
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 3.1e-90 336.3 288 61.8
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 4.0e-90 335.9 283 60.8
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 1.2e-89 334.3 320 54.4
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 2.0e-89 333.6 310 57.1
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 2.0e-89 333.6 283 60.1
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 5.8e-89 332.0 347 53.3
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.0e-88 331.3 310 57.1
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 4.9e-88 328.9 396 49.2
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 4.9e-88 328.9 296 56.8
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 6.5e-88 328.6 319 57.4
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 6.5e-88 328.6 326 55.8
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 1.1e-87 327.8 298 56.7
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.4e-87 327.4 281 59.8
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.9e-87 327.0 288 58.0
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 2.5e-87 326.6 283 60.1
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 3.2e-87 326.2 283 60.1
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 5.5e-87 325.5 283 60.4
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.6e-86 323.9 283 58.7
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 2.3e-85 320.1 285 60.7
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 3.9e-85 319.3 285 57.2
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 6.7e-85 318.5 320 56.9
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 3.1e-82 309.7 302 56.0
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 6.9e-82 308.5 283 55.8
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 9.0e-82 308.1 235 64.7
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 9.0e-82 308.1 307 58.3
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 9.7e-76 288.1 277 53.4
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 2.2e-75 287.0 287 53.0
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 2.8e-75 286.6 282 57.1
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 2.8e-75 286.6 273 57.5
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 1.8e-74 283.9 299 51.8
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.6e-70 269.2 228 60.1
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 4.6e-70 269.2 288 53.5
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 2.0e-68 263.8 282 53.2
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.0e-68 263.8 332 47.9
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.8e-67 260.0 283 52.7
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 2.6e-60 236.9 300 45.0
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 5.7e-60 235.7 312 42.3
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 3.2e-55 219.9 255 49.8
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 2.0e-52 210.7 302 40.1
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 5.9e-49 199.1 146 65.8
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 1.7e-43 181.0 154 63.0
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 2.2e-43 180.6 136 64.0
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 8.3e-43 178.7 353 36.8
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 8.3e-43 178.7 226 42.0
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 7.2e-39 165.6 275 39.3
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 4.7e-38 162.9 155 56.8
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.9e-31 141.0 300 36.3
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.2e-30 138.3 358 30.4
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 7.5e-28 129.0 162 43.8
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 2.2e-19 100.9 67 70.1
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.2e-19 100.9 142 40.1
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 5.6e-15 86.3 115 49.6
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 2.4e-10 70.9 150 33.3
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 4.1e-10 70.1 91 41.8
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 2.3e-08 64.3 58 53.4
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 2.3e-08 64.3 58 53.4


User provided reference genes

Program Settings