Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005412g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-46 188.3 89 100.0
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-32 141.4 87 77.0
Nitab4.5_0000138g0190 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-31 137.9 74 86.5
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-29 131.7 79 73.4
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-28 126.7 79 72.2
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-27 125.2 79 65.8
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-26 122.9 79 65.8
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.3e-26 120.2 77 66.2
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-25 119.0 79 68.4
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-25 118.6 79 68.4
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-25 118.6 79 65.8
Nitab4.5_0007565g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-24 115.2 77 66.2
Nitab4.5_0013458g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-23 112.8 114 50.0
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-19 99.0 63 71.4
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-16 89.7 79 51.9
Nitab4.5_0000566g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.6e-13 78.2 79 51.9
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-09 65.5 80 35.0
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-09 65.1 45 68.9
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 4.1e-09 64.7 80 35.0
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-09 64.3 75 42.7
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.4e-09 64.3 80 38.8
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 7.0e-09 63.9 80 35.0
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.2e-09 63.5 78 44.9
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-08 63.2 80 33.8
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-08 62.8 78 43.6
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-08 62.8 80 40.0
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-08 62.0 78 44.9
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.5e-08 61.2 80 40.0
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-08 61.2 78 43.6
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.9e-08 60.8 78 42.3
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.9e-08 60.8 78 43.6
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.8e-08 60.5 78 43.6
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.8e-08 60.5 78 43.6
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-07 58.9 80 37.5
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-07 58.9 80 37.5
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-07 58.5 80 30.0
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-07 58.5 80 31.2
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.9e-07 58.2 80 36.2
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.0e-07 57.8 80 37.5
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.6e-07 57.4 72 44.4
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.6e-07 57.0 80 36.2
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.6e-07 57.0 78 41.0
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.6e-07 57.0 80 37.5
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.6e-07 57.0 80 37.5
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-06 56.6 80 36.2
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-06 55.8 78 42.3
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-06 55.8 72 44.4
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-06 55.8 72 37.5
Sopen01g014170 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-06 55.5 79 30.4
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-06 55.1 80 33.8
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-06 54.7 80 40.0
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 5.6e-06 54.3 80 28.8
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 5.6e-06 54.3 80 28.8
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 5.6e-06 54.3 80 28.8
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 5.6e-06 54.3 80 28.8
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-06 54.3 79 38.0
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.3e-06 53.9 80 36.2
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.5e-06 53.5 78 42.3


User provided reference genes

Program Settings