Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 0.0e+00 1265.4 658 100.0
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 5.0e-261 904.4 658 75.2
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 5.5e-260 901.0 650 75.8
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 1.7e-253 879.4 666 73.4
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 5.2e-242 841.3 622 72.8
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 1.2e-241 840.1 639 72.1
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 5.9e-238 827.8 665 68.3
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 5.5e-236 821.2 650 68.6
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 5.0e-229 798.1 650 66.6
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 1.4e-223 780.0 606 69.5
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 1.9e-220 769.6 651 63.3
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 1.2e-217 760.4 630 67.9
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.7e-216 755.4 651 63.1
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 5.4e-215 751.5 651 63.3
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 5.1e-213 745.0 652 61.0
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 9.5e-212 740.7 669 61.9
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 1.2e-211 740.3 533 76.9
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 4.7e-211 738.4 651 62.1
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 3.4e-209 732.3 651 60.8
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 1.6e-206 723.4 672 59.4
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 4.6e-206 721.8 653 60.0
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 1.1e-204 717.2 649 59.9
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 3.1e-202 709.1 652 59.4
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 8.9e-202 707.6 647 60.6
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 1.2e-201 707.2 652 59.4
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 4.4e-201 705.3 652 60.1
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.7e-200 703.4 652 59.5
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 6.4e-200 701.4 647 59.4
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 8.4e-200 701.0 657 58.8
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.4e-199 699.5 650 59.2
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 2.4e-199 699.5 678 58.1
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 2.4e-199 699.5 651 58.2
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 3.2e-199 699.1 670 57.9
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 7.1e-199 698.0 650 58.9
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 3.5e-198 695.7 650 59.1
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 3.5e-198 695.7 649 58.9
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 6.0e-198 694.9 650 58.9
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.3e-197 693.0 650 58.8
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 6.6e-197 691.4 648 59.1
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 8.7e-197 691.0 647 59.0
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 5.6e-196 688.3 655 57.9
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 9.6e-196 687.6 648 59.0
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 9.6e-196 687.6 631 59.0
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 1.6e-195 686.8 648 56.9
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 1.6e-195 686.8 659 57.2
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 2.1e-195 686.4 647 58.7
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 3.6e-195 685.6 648 58.0
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 3.6e-195 685.6 678 56.6
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 3.6e-195 685.6 649 57.5
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 4.8e-195 685.3 659 57.2
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 1.4e-194 683.7 659 57.2
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 3.1e-194 682.6 672 57.0
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 6.9e-194 681.4 653 58.0
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 9.0e-194 681.0 671 57.4
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 1.2e-193 680.6 660 57.3
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 1.2e-193 680.6 604 61.6
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 2.6e-193 679.5 648 57.9
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 3.4e-193 679.1 688 55.4
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 4.4e-193 678.7 655 57.6
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 5.8e-193 678.3 607 59.6
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 5.8e-193 678.3 755 52.7
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 1.4e-191 673.7 652 57.7
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 1.9e-191 673.3 661 56.3
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 3.2e-191 672.5 648 57.4
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 7.1e-191 671.4 652 56.6
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 7.1e-191 671.4 648 56.9
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 1.2e-190 670.6 653 56.7
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 1.7e-189 666.8 651 56.8
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 1.1e-188 664.1 652 55.7
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 7.3e-188 661.4 729 53.4
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 2.1e-187 659.8 704 54.1
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 3.6e-187 659.1 701 53.1
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 1.4e-186 657.1 652 56.7
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 2.4e-186 656.4 638 56.7
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 1.2e-185 654.1 763 50.2
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 2.6e-185 652.9 649 56.4
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 3.4e-185 652.5 649 55.8
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 1.3e-184 650.6 654 55.0
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 3.8e-184 649.0 649 55.5
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 4.2e-183 645.6 649 55.8
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 9.3e-183 644.4 669 55.0
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 9.3e-183 644.4 617 56.4
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 1.6e-182 643.7 653 55.3
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 3.5e-182 642.5 669 54.9
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 6.0e-182 641.7 646 56.3
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 2.3e-181 639.8 642 55.0
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 8.7e-181 637.9 638 56.3
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 3.3e-180 636.0 644 54.8
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 7.4e-180 634.8 657 55.3
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 5.3e-178 628.6 653 53.8
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 6.9e-178 628.2 598 58.4
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 2.6e-177 626.3 651 53.0
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 1.7e-176 623.6 645 53.3
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 4.2e-175 619.0 619 55.4
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 7.1e-175 618.2 647 53.2
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 9.3e-175 617.8 624 56.4
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 1.2e-174 617.5 652 53.2
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 2.1e-174 616.7 668 51.9
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 3.5e-174 615.9 661 51.9
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 4.6e-174 615.5 584 57.9
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 6.0e-174 615.1 652 52.6
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 3.0e-173 612.8 644 53.6
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 3.0e-173 612.8 662 51.7
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 1.1e-172 610.9 669 52.3
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 1.9e-172 610.1 662 51.8
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 3.3e-172 609.4 621 54.3
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 4.3e-172 609.0 652 52.9
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 2.4e-170 603.2 624 53.2
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 5.3e-170 602.1 662 51.2
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 9.0e-170 601.3 693 50.2
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 8.4e-168 594.7 688 50.0
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 1.1e-167 594.3 669 51.7
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 1.1e-167 594.3 586 53.9
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 3.2e-167 592.8 687 49.8
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 7.2e-167 591.7 645 51.6
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 1.9e-164 583.6 662 50.6
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 3.3e-164 582.8 653 51.9
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 2.8e-163 579.7 685 49.1
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 6.3e-163 578.6 666 49.5
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 2.6e-161 573.2 667 49.5
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 4.5e-161 572.4 621 52.7
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 4.5e-161 572.4 646 49.8
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 8.5e-160 568.2 659 50.1
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 2.1e-158 563.5 640 48.9
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 3.6e-158 562.8 660 48.2
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 4.6e-158 562.4 671 49.8
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 4.6e-158 562.4 671 49.8
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 6.1e-158 562.0 669 49.0
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 6.1e-158 562.0 669 49.0
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 2.3e-157 560.1 648 51.2
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 3.9e-157 559.3 649 50.4
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 6.7e-157 558.5 668 49.3
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 3.3e-156 556.2 652 48.5
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 5.9e-153 545.4 651 48.2
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 2.0e-145 520.4 639 47.4
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 1.8e-141 507.3 700 44.0
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 2.0e-140 503.8 538 51.7
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 1.2e-137 494.6 689 44.1
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.7e-123 447.6 655 44.3
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 6.8e-117 425.6 526 47.7
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 1.4e-109 401.4 655 40.3
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 7.3e-103 379.0 439 49.4
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 2.0e-92 344.4 327 57.5
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.2e-89 335.1 429 47.6
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 2.8e-86 323.9 667 33.6
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 2.2e-83 314.3 308 55.8
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 3.5e-73 280.4 321 53.9
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 8.4e-59 232.6 327 45.3
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 2.3e-56 224.6 322 42.5
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 8.7e-56 222.6 263 51.0
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 1.5e-55 221.9 289 45.3
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 1.3e-54 218.8 299 44.1
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 5.9e-52 209.9 502 33.5
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 1.3e-51 208.8 284 45.8
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 2.7e-41 174.5 579 27.6
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 3.6e-41 174.1 223 48.0
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 3.7e-38 164.1 383 32.6
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 3.2e-34 151.0 254 43.3
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 7.9e-33 146.4 192 46.4
CBR_g32152 Chara braunii HOM05D003718 ORTHO05D004402 3.9e-32 144.1 603 26.2
Actinidia25800 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.5e-31 142.1 195 43.6
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 2.2e-30 138.3 189 43.4
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea HOM05D003718 ORTHO05D004402 5.9e-28 130.2 108 58.3
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 6.5e-27 126.7 89 68.5
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 8.0e-25 119.8 144 49.3
Pp3c7_6480 Physcomitrium patens HOM05D003718 ORTHO05D004402 2.8e-22 111.3 341 30.2
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 5.3e-21 107.1 115 55.7
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea HOM05D003718 ORTHO05D004402 2.5e-18 98.2 73 69.9
Lsat_1_v5_gn_4_881 Lactuca sativa HOM05D003718 ORTHO05D004402 2.5e-18 98.2 127 46.5
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 9.4e-18 96.3 97 56.7
Lsat_1_v5_gn_3_107020 Lactuca sativa HOM05D003718 ORTHO05D004402 1.2e-17 95.9 105 51.4
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 6.1e-17 93.6 97 54.6
SMO367G0218 Selaginella moellendorffii HOM05D003718 ORTHO05D004402 6.8e-16 90.1 133 41.4
Actinidia30157 Actinidia chinensis HOM05D003718 ORTHO05D057597 8.8e-16 89.7 83 57.8
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 5.7e-15 87.0 60 71.7
FAN27G1677 Fragaria x ananassa HOM05D003718 ORTHO05D004402 9.1e-13 79.7 180 33.3
Lsat_1_v5_gn_9_27880 Lactuca sativa HOM05D003718 ORTHO05D004402 9.1e-13 79.7 176 34.1
Gohir.A01G185580 Gossypium hirsutum HOM05D003718 ORTHO05D000087 8.6e-11 73.2 78 55.1
arahy.Tifrunner.gnm1.ann1.LM6F6Z Arachis hypogaea HOM05D003718 ORTHO05D004402 2.8e-09 68.2 51 56.9
Actinidia25801 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.4e-08 65.9 117 36.8


User provided reference genes

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