Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-137 492.7 271 100.0
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-85 320.5 286 64.3
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-85 318.9 317 58.4
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.2e-85 317.8 238 73.5
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-79 298.5 313 58.1
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-78 297.4 342 53.2
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-78 296.2 338 54.1
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-74 283.9 345 51.6
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-73 278.5 378 46.8
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.7e-72 276.2 370 47.8
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-70 267.7 373 48.0
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.2e-69 264.6 180 73.3
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-68 264.2 180 75.6
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-67 260.4 345 50.4
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.9e-67 258.5 180 74.4
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-65 253.8 170 77.6
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-65 253.4 159 79.2
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-65 251.1 205 65.9
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-64 249.6 329 50.5
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.8e-63 245.0 180 71.7
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-62 242.7 294 53.7
Nitab4.5_0000857g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-60 236.9 180 71.1
Nitab4.5_0000512g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-58 230.3 163 72.4
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 8.0e-56 221.5 288 50.7
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-55 220.3 176 68.8
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-54 216.1 284 50.0
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-54 215.7 179 66.5
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-53 214.2 178 66.9
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-53 211.8 240 56.2
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-52 210.7 294 51.7
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-52 208.4 281 49.5
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-50 203.4 255 49.4
Nitab4.5_0003295g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-49 198.0 128 78.1
Nitab4.5_0000053g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-48 196.4 175 59.4
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-47 193.4 299 45.8
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-47 193.0 273 46.9
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-46 189.1 307 44.3
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-45 185.7 327 41.6
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-44 183.7 252 49.6
Nitab4.5_0000348g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-41 173.3 128 71.9
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-39 167.9 249 47.4
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-39 166.0 294 43.9
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-39 166.0 249 47.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-38 162.5 262 47.3
Nitab4.5_0005762g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-36 157.9 130 67.7
Nitab4.5_0020094g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-34 149.8 106 72.6
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-33 146.0 120 68.3
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-32 143.3 110 70.0
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 2.8e-32 143.3 386 31.3
Nitab4.5_0002941g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-31 141.0 93 79.6
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-31 140.2 84 81.0
Nitab4.5_0001247g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-29 133.3 113 67.3
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 6.4e-29 132.1 352 31.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-26 123.2 75 78.7
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-26 122.9 103 69.9
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-26 122.5 117 65.8
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.6e-26 122.1 181 40.3
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-25 120.9 211 38.9
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-25 119.4 102 69.6
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-25 119.4 103 69.9
Nitab4.5_0001057g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.3e-25 118.6 67 82.1
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-24 117.9 211 37.9
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-24 117.1 116 64.7
Nitab4.5_0008600g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.6e-24 116.3 70 78.6
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.2e-24 115.5 75 73.3
Nitab4.5_0001250g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-23 114.8 66 80.3
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-23 114.4 85 67.1
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.8e-23 114.0 314 31.8
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.8e-23 112.1 106 65.1
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-22 111.3 111 64.0
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-22 111.3 68 76.5
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-22 110.5 103 66.0
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.0e-22 110.5 213 36.6
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-22 109.0 95 68.4
Nitab4.5_0000362g0190 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-21 106.3 67 77.6
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.9e-20 104.0 55 83.6
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-20 102.1 103 64.1
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-18 98.2 163 44.2
Nitab4.5_0009418g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-18 97.8 57 77.2
Nitab4.5_0026749g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-18 96.7 59 74.6
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-17 94.7 88 65.9
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.5e-17 94.4 349 28.1
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.3e-17 93.2 170 38.2
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-17 92.4 304 30.3
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-16 90.5 66 78.8
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 3.6e-16 89.7 82 67.1
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 6.2e-16 89.0 116 47.4
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.1e-16 88.6 66 80.3
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-15 87.8 91 60.4
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-15 87.0 160 35.6
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 2.4e-15 87.0 118 46.6
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 5.3e-15 85.9 105 48.6
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 6.9e-15 85.5 269 30.1
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 6.9e-15 85.5 102 49.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.0e-15 85.1 375 25.1
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.0e-15 85.1 102 49.0
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-14 84.3 103 55.3
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-14 84.3 353 30.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.5e-14 84.3 362 26.2
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-14 84.3 102 50.0
Nitab4.5_0001599g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-14 83.6 159 35.8
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.6e-14 83.6 342 27.5
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.6e-14 83.6 202 35.1
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 3.4e-14 83.2 60 80.0
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.7e-13 80.9 118 44.9
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-13 80.1 56 78.6
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-13 79.3 333 26.7
Nitab4.5_0000667g0070 Nicotiana tabacum HOM05D003574 ORTHO05D001773 6.4e-13 79.0 85 55.3
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.9e-12 77.4 92 57.6
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-12 76.3 45 66.7
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-11 74.3 292 28.8
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.7e-11 73.6 160 37.5
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-10 71.6 152 34.2
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-10 71.2 45 88.9
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-10 70.9 86 50.0
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-10 69.7 143 40.6
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 68.2 193 29.5
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 2.5e-09 67.0 159 32.1
Nitab4.5_0000481g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.3e-09 65.5 37 70.3
Nitab4.5_0003598g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-09 65.1 134 32.8
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-07 60.1 258 26.0
Nitab4.5_0007326g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-07 60.1 40 87.5
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.0e-07 59.7 88 47.7
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-07 59.3 308 26.0
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-07 59.3 286 23.8
Nitab4.5_0007499g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-06 58.2 48 62.5
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-06 57.8 71 47.9
Nitab4.5_0005263g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-06 57.4 39 82.1
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.0e-06 57.4 69 47.8
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-06 56.2 189 29.1
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-06 56.2 178 30.3


User provided reference genes

Program Settings