Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.5e-136 488.8 250 100.0
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 9.2e-115 417.2 238 91.2
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 6.6e-105 384.4 250 82.4
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 1.9e-104 382.9 250 82.4
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.2e-103 380.2 259 80.3
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 2.3e-102 375.9 254 81.1
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 7.3e-80 301.2 192 77.1
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 2.8e-79 299.3 203 73.9
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 4.8e-79 298.5 171 83.0
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 1.1e-78 297.4 198 72.2
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.1e-78 297.4 192 76.6
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 2.0e-77 293.1 198 73.2
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 3.4e-77 292.4 238 64.3
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 3.4e-77 292.4 193 74.1
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 5.8e-77 291.6 223 68.6
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 9.9e-77 290.8 236 64.4
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.3e-76 290.4 170 81.2
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.3e-76 290.4 210 69.5
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 3.8e-76 288.9 236 63.6
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 1.1e-75 287.3 187 73.3
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.4e-75 287.0 198 71.2
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 3.2e-75 285.8 258 58.9
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 3.2e-75 285.8 178 76.4
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 5.4e-75 285.0 203 70.4
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 9.3e-75 284.3 178 75.8
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 2.1e-74 283.1 167 79.6
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.1e-74 283.1 209 68.4
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 2.1e-74 283.1 237 63.3
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 3.5e-74 282.3 187 73.3
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 6.0e-74 281.6 208 68.3
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 6.0e-74 281.6 178 77.0
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 6.0e-74 281.6 212 69.3
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 6.0e-74 281.6 248 61.7
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 2.3e-73 279.6 230 63.9
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 3.0e-73 279.3 230 63.9
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 5.1e-73 278.5 240 62.1
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 5.1e-73 278.5 240 62.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 1.1e-72 277.3 189 72.0
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.9e-72 276.6 179 73.7
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 3.3e-72 275.8 190 71.1
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 7.4e-72 274.6 218 64.2
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 9.6e-72 274.2 194 70.6
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.3e-71 273.9 243 59.7
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 2.1e-71 273.1 178 75.8
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.8e-71 272.7 217 64.5
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 4.8e-71 271.9 183 74.3
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 6.2e-71 271.6 196 66.8
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.2e-71 271.6 225 63.6
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 1.4e-70 270.4 243 58.8
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 2.4e-70 269.6 249 57.0
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 2.4e-70 269.6 204 65.7
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.4e-70 269.6 196 66.3
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 5.3e-70 268.5 234 58.5
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 5.3e-70 268.5 186 72.0
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.2e-69 267.3 190 69.5
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.5e-69 266.9 194 68.6
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 4.5e-69 265.4 209 63.2
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 5.8e-69 265.0 249 56.2
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 2.9e-68 262.7 187 69.0
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 3.8e-68 262.3 209 62.2
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 8.4e-68 261.2 201 63.7
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 1.1e-67 260.8 194 63.4
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 1.4e-67 260.4 209 61.7
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 2.4e-67 259.6 209 61.7
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 2.4e-67 259.6 209 61.7
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 2.4e-67 259.6 190 64.2
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 2.4e-67 259.6 166 77.1
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 4.2e-67 258.8 200 64.0
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 5.5e-67 258.5 190 64.2
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 5.5e-67 258.5 196 61.2
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 9.3e-67 257.7 210 59.5
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.6e-66 256.9 177 68.9
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 2.1e-66 256.5 190 65.8
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 3.5e-66 255.8 188 63.3
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 3.5e-66 255.8 200 63.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 4.6e-66 255.4 240 59.2
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 6.0e-66 255.0 181 67.4
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 6.0e-66 255.0 249 54.2
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 7.9e-66 254.6 192 62.5
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.0e-65 254.2 216 58.8
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 2.3e-65 253.1 162 75.3
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 2.3e-65 253.1 187 63.1
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.1e-64 250.8 180 66.7
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.5e-64 250.4 188 61.2
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 1.9e-64 250.0 231 55.4
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 1.9e-64 250.0 203 62.1
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 2.5e-64 249.6 188 62.2
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 2.5e-64 249.6 188 62.2
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 9.6e-64 247.7 193 62.2
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 9.6e-64 247.7 193 62.2
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 9.6e-64 247.7 201 62.2
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 9.6e-64 247.7 144 83.3
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.6e-63 246.9 182 64.3
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 2.8e-63 246.1 192 59.9
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 3.7e-63 245.7 173 67.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 6.2e-63 245.0 193 62.2
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 6.2e-63 245.0 165 72.1
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.8e-62 243.4 189 60.8
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 3.4e-61 239.2 218 58.3
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 2.9e-60 236.1 148 78.4
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 3.2e-59 232.6 176 61.9
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.5e-58 229.2 193 58.0
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 4.6e-58 228.8 176 60.2
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.0e-57 227.6 184 60.3
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.0e-57 227.6 154 70.8
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 3.0e-57 226.1 155 65.8
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 2.5e-56 223.0 198 58.1
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 2.4e-54 216.5 200 60.5
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 4.1e-54 215.7 225 55.6
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 5.9e-53 211.8 197 55.3
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 4.2e-51 205.7 127 79.5
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 4.6e-50 202.2 130 76.2
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 8.7e-49 198.0 219 46.6
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 8.7e-49 198.0 159 57.2
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.6e-47 193.7 126 74.6
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 9.1e-46 188.0 145 60.7
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 1.5e-45 187.2 159 61.0
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 1.0e-44 184.5 150 62.0
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 8.5e-44 181.4 155 59.4
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 7.9e-42 174.9 159 56.0
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 7.9e-42 174.9 187 51.3
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 8.2e-39 164.9 95 82.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 3.4e-37 159.5 82 95.1
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 7.2e-35 151.8 137 58.4
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.5e-32 144.1 150 52.7
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 6.1e-26 122.1 156 47.4
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 4.4e-24 115.9 79 68.4
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 2.4e-22 110.2 148 48.0
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.7e-20 104.0 120 48.3
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 1.5e-16 90.9 161 31.7
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 2.0e-13 80.5 50 74.0
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 9.5e-11 71.6 129 27.9
Cre11.g467679 Chlamydomonas reinhardtii HOM05D019738 ORTHO05D022279 2.0e-08 63.9 143 30.8
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 4.4e-08 62.8 36 77.8
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 2.8e-07 60.1 36 61.1


User provided reference genes

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