Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.5e-66 255.4 138 100.0
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.8e-62 241.5 142 93.7
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 6.3e-57 224.2 142 85.2
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 1.5e-55 219.5 142 86.6
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 2.6e-55 218.8 142 82.4
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.4e-48 196.4 142 77.5
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.8e-35 152.9 144 63.9
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 3.0e-35 152.1 145 62.8
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 5.2e-35 151.4 175 57.1
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 2.0e-34 149.4 142 63.4
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.6e-34 149.1 140 62.1
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 4.9e-33 144.8 143 65.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 8.3e-33 144.1 140 61.4
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.4e-32 143.3 141 63.8
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 9.1e-32 140.6 144 59.7
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 9.1e-32 140.6 146 57.5
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 9.1e-32 140.6 145 61.4
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 2.0e-31 139.4 146 59.6
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 2.7e-31 139.0 144 59.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 2.7e-31 139.0 148 58.1
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 3.5e-31 138.7 142 59.9
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 4.5e-31 138.3 139 60.4
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 5.9e-31 137.9 145 57.9
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 7.7e-31 137.5 144 60.4
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 1.0e-30 137.1 146 61.0
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.3e-30 136.7 147 59.9
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 1.3e-30 136.7 145 60.7
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.7e-30 136.3 147 57.8
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.3e-30 136.0 144 56.9
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.3e-30 136.0 142 59.2
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 2.3e-30 136.0 145 58.6
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 2.3e-30 136.0 89 82.0
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 2.9e-30 135.6 144 55.6
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.8e-30 135.2 83 85.5
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.0e-30 134.8 149 60.4
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 5.0e-30 134.8 145 60.0
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 6.6e-30 134.4 145 58.6
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 6.6e-30 134.4 151 58.9
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 6.6e-30 134.4 145 59.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 8.6e-30 134.0 145 60.7
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 1.1e-29 133.7 149 55.7
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 1.1e-29 133.7 135 60.0
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 1.1e-29 133.7 144 56.2
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.5e-29 133.3 140 53.6
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.5e-29 133.3 147 60.5
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.5e-29 133.3 142 58.5
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.9e-29 132.9 151 59.6
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.9e-29 132.9 145 57.9
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.5e-29 132.5 147 55.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 2.5e-29 132.5 145 57.9
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.3e-29 132.1 97 73.2
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.3e-29 132.1 150 55.3
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 9.5e-29 130.6 150 56.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 1.2e-28 130.2 143 56.6
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.2e-28 130.2 144 57.6
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.6e-28 129.8 150 54.7
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.1e-28 129.4 145 55.2
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 3.6e-28 128.6 145 56.6
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 4.7e-28 128.3 144 57.6
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 6.1e-28 127.9 138 55.8
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 6.1e-28 127.9 145 57.9
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 8.0e-28 127.5 82 79.3
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.0e-27 127.1 87 77.0
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.8e-27 126.3 147 57.8
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.8e-27 126.3 147 53.7
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.8e-27 126.3 146 57.5
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 3.0e-27 125.6 148 56.1
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 3.0e-27 125.6 145 53.1
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 5.2e-27 124.8 148 54.1
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 6.8e-27 124.4 145 53.1
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 6.8e-27 124.4 145 53.8
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.2e-26 123.6 146 53.4
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 1.5e-26 123.2 148 54.7
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 1.5e-26 123.2 148 54.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 2.0e-26 122.9 148 54.1
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 2.0e-26 122.9 148 54.1
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.0e-26 122.9 138 55.8
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 2.0e-26 122.9 82 79.3
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 2.0e-26 122.9 147 54.4
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.0e-26 122.9 149 55.0
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 4.4e-26 121.7 150 52.7
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.7e-26 121.3 144 54.2
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.7e-26 121.3 142 51.4
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 7.5e-26 120.9 82 75.6
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 9.8e-26 120.6 100 68.0
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 2.9e-25 119.0 153 52.9
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 4.9e-25 118.2 86 65.1
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 6.3e-25 117.9 148 52.0
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.4e-24 116.7 129 57.4
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.1e-24 115.2 131 58.0
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 4.1e-24 115.2 142 52.1
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.2e-23 113.6 82 70.7
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.0e-23 112.8 131 55.7
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.5e-23 112.1 129 55.0
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.0e-22 110.5 93 67.7
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.7e-22 109.8 72 80.6
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.3e-22 109.4 82 68.3
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 3.9e-22 108.6 87 67.8
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.6e-20 103.2 132 50.8
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 2.1e-20 102.8 138 43.5
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 2.3e-19 99.4 118 51.7
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.0e-19 98.6 83 65.1
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 3.7e-17 92.0 82 53.7
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 5.4e-16 88.2 131 46.6
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.6e-14 81.3 90 55.6
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 8.6e-14 80.9 84 50.0
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 3.3e-13 79.0 101 52.5
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 4.3e-13 78.6 86 48.8
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 9.5e-13 77.4 55 72.7
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 1.6e-12 76.6 84 50.0
Peaxi162Scf00447g00114 Petunia axillaris HOM05D000049 ORTHO05D008785 1.6e-12 76.6 60 71.7
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 8.1e-12 74.3 108 48.1
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 8.1e-12 74.3 113 44.2
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 1.4e-11 73.6 83 45.8
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 4.0e-11 72.0 82 45.1
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.1e-07 59.7 47 68.1


User provided reference genes

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