Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 6.4e-162 573.9 272 100.0
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 3.2e-153 545.0 284 91.9
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 3.4e-139 498.4 270 86.7
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 3.2e-137 491.9 270 85.9
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 1.2e-136 490.0 270 85.6
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 9.6e-126 453.8 280 77.9
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 1.3e-106 390.2 260 70.0
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 1.5e-102 376.7 273 65.2
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 7.7e-99 364.4 270 65.2
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 1.7e-98 363.2 273 63.7
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 2.2e-98 362.8 255 66.7
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 2.9e-98 362.5 273 63.4
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 2.7e-96 355.9 273 60.4
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 1.0e-95 354.0 269 63.9
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 3.0e-95 352.4 259 64.1
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 3.9e-95 352.1 255 65.5
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 6.7e-95 351.3 273 59.7
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 3.3e-94 349.0 269 61.3
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 2.8e-93 345.9 267 60.3
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 5.9e-91 338.2 269 58.4
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 1.0e-90 337.4 259 59.8
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 3.8e-90 335.5 257 59.9
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 5.0e-90 335.1 271 58.7
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 1.9e-89 333.2 259 61.0
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 5.5e-89 331.6 250 61.2
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 5.5e-89 331.6 262 58.4
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 9.4e-89 330.9 259 61.0
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 9.4e-89 330.9 270 60.0
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 2.1e-88 329.7 285 55.4
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 2.1e-88 329.7 265 56.6
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 3.0e-87 325.9 259 58.3
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 4.0e-87 325.5 254 59.4
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 5.2e-87 325.1 253 59.7
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 8.8e-87 324.3 265 56.2
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 1.1e-86 323.9 264 58.0
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 2.6e-86 322.8 264 57.2
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 4.4e-86 322.0 264 56.4
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 5.7e-86 321.6 253 59.7
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 5.7e-86 321.6 260 56.5
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 2.8e-85 319.3 276 54.7
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 6.3e-85 318.2 233 62.2
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 1.4e-84 317.0 253 58.5
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.8e-84 316.6 250 60.8
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.8e-84 316.6 250 60.8
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 2.4e-84 316.2 254 57.5
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 2.4e-84 316.2 254 58.7
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 3.1e-84 315.8 257 59.5
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.1e-84 315.8 250 60.8
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 5.3e-84 315.1 254 57.9
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 7.0e-84 314.7 271 54.6
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 9.1e-84 314.3 261 56.7
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.2e-83 313.9 250 60.4
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 1.6e-83 313.5 236 63.6
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 1.6e-83 313.5 258 58.1
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 2.0e-83 313.2 268 56.3
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 1.0e-82 310.8 241 63.1
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 2.2e-82 309.7 240 62.5
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 2.9e-82 309.3 259 55.2
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 5.0e-82 308.5 258 54.7
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 6.5e-82 308.1 261 55.2
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 8.5e-82 307.8 266 55.6
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 1.1e-81 307.4 258 55.8
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 1.5e-81 307.0 251 54.2
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.5e-81 307.0 240 62.1
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 1.9e-81 306.6 259 57.5
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 7.2e-81 304.7 263 54.4
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 2.1e-80 303.1 256 55.9
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 2.7e-80 302.8 259 56.8
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 3.6e-80 302.4 240 62.1
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 3.0e-79 299.3 267 53.2
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 6.8e-79 298.1 257 56.4
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 8.8e-79 297.7 257 53.7
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 1.2e-78 297.4 270 52.6
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 2.2e-77 293.1 235 61.7
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 6.3e-77 291.6 259 54.1
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 1.1e-76 290.8 253 53.0
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 4.1e-76 288.9 259 53.3
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 5.4e-76 288.5 254 53.9
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 9.1e-76 287.7 260 53.8
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 9.1e-76 287.7 281 49.1
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 1.6e-75 287.0 259 52.9
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 2.7e-75 286.2 268 48.5
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 3.5e-75 285.8 260 53.1
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 5.9e-75 285.0 262 50.0
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 5.9e-75 285.0 224 58.5
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 7.7e-75 284.6 260 52.7
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 3.8e-74 282.3 255 52.5
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.2e-72 277.3 237 58.2
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 2.1e-72 276.6 217 59.0
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 6.1e-72 275.0 253 49.4
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 6.1e-72 275.0 260 52.7
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 8.0e-72 274.6 237 57.0
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 2.7e-67 259.6 237 54.4
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 1.9e-65 253.4 214 52.8
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 1.0e-63 247.7 258 48.8
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 5.2e-63 245.4 241 51.9
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 1.9e-57 226.9 258 45.3
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 1.4e-55 220.7 164 59.8
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 2.9e-53 213.0 173 61.3
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 1.1e-52 211.1 152 61.2
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 1.1e-52 211.1 257 40.9
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 1.1e-49 201.1 210 46.2
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 1.5e-49 200.7 208 47.6
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 4.9e-45 185.7 241 46.5
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 4.1e-44 182.6 250 42.8
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 4.6e-43 179.1 242 44.2
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 5.1e-42 175.6 247 40.5
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 1.3e-37 161.0 199 45.2
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 9.2e-36 154.8 217 37.8
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 1.5e-33 147.5 191 38.7
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 1.9e-33 147.1 130 58.5
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 3.6e-32 142.9 225 35.1
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 6.2e-32 142.1 133 53.4
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 4.4e-30 136.0 103 63.1
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 4.9e-29 132.5 216 34.3
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 3.5e-27 126.3 80 66.2
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 7.8e-27 125.2 152 42.8
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 1.7e-26 124.0 244 31.6
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.9e-25 120.6 109 56.9
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 9.6e-25 118.2 114 53.5
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 1.3e-24 117.9 109 56.9
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 1.3e-16 91.3 134 38.8
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 2.9e-13 80.1 55 69.1
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 1.9e-12 77.4 70 51.4
CSS0021359 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 2.7e-11 73.6 123 39.8
CBR_g7977 Chara braunii HOM05D006625 ORTHO05D008060 1.5e-09 67.8 107 32.7
Cre03.g200651 Chlamydomonas reinhardtii HOM05D006625 ORTHO05D008060 1.6e-08 64.3 300 21.7
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 6.2e-08 62.4 272 23.5
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 9.0e-07 58.5 279 22.6
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 1.5e-06 57.8 242 25.2
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 2.6e-06 57.0 259 23.6
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 4.5e-06 56.2 256 25.0
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 7.6e-06 55.5 88 36.4


User provided reference genes

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