Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005380g0010 Nicotiana tabacum HOM05D006722 ORTHO05D007944 1.4e-62 242.7 117 100.0
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 3.1e-33 145.2 140 60.7
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.5e-27 126.3 133 54.9
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 2.6e-27 125.6 133 55.6
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 5.0e-23 111.3 133 52.6
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 1.5e-19 99.8 115 49.6
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 5.8e-19 97.8 96 55.2
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 2.1e-16 89.4 123 39.0
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 6.0e-16 87.8 136 44.9
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 2.3e-15 85.9 87 54.0
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 2.3e-15 85.9 117 42.7
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 3.9e-15 85.1 110 48.2
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 8.6e-15 84.0 128 39.1
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 2.5e-14 82.4 123 40.7
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 7.3e-14 80.9 127 40.9
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 7.3e-14 80.9 105 47.6
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.2e-13 80.1 130 36.2
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 6.2e-13 77.8 131 42.0
Actinidia11069 Actinidia chinensis HOM05D006722 ORTHO05D007944 1.2e-11 73.6 99 42.4
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.5e-11 73.2 116 39.7
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.6e-11 72.4 116 38.8
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 7.5e-11 70.9 131 38.2
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 2.9e-10 68.9 112 42.9
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 3.7e-10 68.6 106 40.6
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 4.9e-10 68.2 129 33.3
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 4.9e-10 68.2 114 37.7
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.1e-09 67.0 105 41.9
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.4e-09 66.6 144 34.0
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 1.9e-09 66.2 88 43.2
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 5.4e-09 64.7 123 35.8
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 2.1e-08 62.8 113 38.1
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.1e-08 62.8 111 37.8
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 2.7e-08 62.4 93 41.9
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 3.5e-08 62.0 112 38.4
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 4.6e-08 61.6 118 38.1
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 4.6e-08 61.6 105 39.0
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 6.0e-08 61.2 101 40.6
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 7.8e-08 60.8 99 38.4
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 1.0e-07 60.5 109 36.7
QL08p037794 Quercus lobata HOM05D006722 ORTHO05D007944 1.0e-07 60.5 100 43.0
SGA_v2.0_scaffold356G49791 Striga asiatica HOM05D006722 ORTHO05D007944 1.7e-07 59.7 74 45.9
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 3.9e-07 58.5 108 39.8
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 3.9e-07 58.5 108 39.8
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 3.9e-07 58.5 70 44.3
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 6.6e-07 57.8 115 39.1
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.9e-06 56.2 125 34.4
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.5e-06 55.8 107 36.4
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.5e-06 55.8 114 36.8
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 4.3e-06 55.1 106 41.5
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 4.3e-06 55.1 112 42.0
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 4.3e-06 55.1 85 40.0
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 5.6e-06 54.7 107 40.2
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 5.6e-06 54.7 112 40.2
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 7.3e-06 54.3 112 39.3
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 7.3e-06 54.3 109 40.4
MBI02_g19252_MAGBIO Magnolia biondii HOM05D006722 ORTHO05D007944 7.3e-06 54.3 86 38.4
Sabra13G0116200 Salix brachista HOM05D006722 ORTHO05D007944 9.5e-06 53.9 114 36.8


User provided reference genes

Program Settings