Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005379g0060 Nicotiana tabacum HOM05D005286 ORTHO05D006348 4.7e-52 207.6 107 100.0
Nitab4.5_0004530g0050 Nicotiana tabacum HOM05D005286 ORTHO05D006348 3.2e-32 141.7 113 71.7
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.6e-31 139.4 113 72.6
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 6.0e-31 137.5 112 71.4
Nitab4.5_0008592g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 4.3e-21 104.8 94 63.8
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 5.3e-19 97.8 125 56.8
Nitab4.5_0002142g0070 Nicotiana tabacum HOM05D005286 ORTHO05D006348 6.9e-19 97.4 71 77.5
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 1.3e-17 93.2 114 54.4
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 3.5e-15 85.1 118 49.2
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 4.6e-15 84.7 114 50.0
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 4.6e-15 84.7 114 50.0
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 2.4e-11 72.4 115 45.2
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 1.2e-10 70.1 98 43.9
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 2.0e-10 69.3 124 40.3
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 2.0e-10 69.3 94 44.7
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.6e-10 68.9 93 47.3
CSS0038762 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.6e-10 68.9 93 47.3
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 2.6e-10 68.9 102 44.1
CSS0007937 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 7.6e-10 67.4 116 42.2
Dinv24565 Davidia involucrata HOM05D005286 ORTHO05D006348 7.6e-10 67.4 115 42.6
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.0e-09 67.0 134 38.1
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 1.3e-09 66.6 100 46.0
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 2.2e-09 65.9 119 42.0
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 2.9e-09 65.5 115 43.5
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 3.8e-09 65.1 107 39.3
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 3.8e-09 65.1 92 46.7
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 4.9e-09 64.7 89 48.3
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 6.5e-09 64.3 114 42.1
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 1.9e-08 62.8 91 45.1
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 2.5e-08 62.4 105 41.9
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 2.5e-08 62.4 102 41.2
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 3.2e-08 62.0 75 52.0
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 3.2e-08 62.0 117 40.2
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 3.2e-08 62.0 109 39.4
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 3.2e-08 62.0 124 41.1
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 4.2e-08 61.6 103 43.7
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 4.2e-08 61.6 102 44.1
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 5.5e-08 61.2 89 46.1
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 5.5e-08 61.2 95 47.4
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 7.1e-08 60.8 97 44.3
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 9.3e-08 60.5 105 42.9
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 9.3e-08 60.5 99 43.4
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 1.2e-07 60.1 90 47.8
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.2e-07 60.1 114 41.2
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 1.2e-07 60.1 98 46.9
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 2.1e-07 59.3 94 44.7
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 2.1e-07 59.3 111 37.8
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 2.1e-07 59.3 98 42.9
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 3.5e-07 58.5 114 40.4
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 3.5e-07 58.5 114 40.4
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 3.5e-07 58.5 95 41.1
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 4.6e-07 58.2 92 44.6
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 6.0e-07 57.8 104 43.3
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 6.0e-07 57.8 91 44.0
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 7.9e-07 57.4 89 41.6
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 7.9e-07 57.4 113 41.6
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 1.0e-06 57.0 92 41.3
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 1.0e-06 57.0 89 47.2
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 1.0e-06 57.0 98 44.9
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 1.3e-06 56.6 102 40.2
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 1.3e-06 56.6 109 39.4
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 1.8e-06 56.2 92 40.2
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.8e-06 56.2 114 39.5
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.3e-06 55.8 110 40.9
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 3.9e-06 55.1 105 40.0
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 5.1e-06 54.7 93 43.0
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 5.1e-06 54.7 105 40.0
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 5.1e-06 54.7 105 40.0
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 5.1e-06 54.7 92 41.3
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 5.1e-06 54.7 93 39.8
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 6.7e-06 54.3 99 40.4
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 6.7e-06 54.3 99 40.4
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 6.7e-06 54.3 93 43.0
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 6.7e-06 54.3 93 43.0
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 6.7e-06 54.3 94 44.7
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 8.7e-06 53.9 101 39.6
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 8.7e-06 53.9 92 39.1
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 8.7e-06 53.9 96 40.6
QL10p041267 Quercus lobata HOM05D005286 ORTHO05D006348 8.7e-06 53.9 99 42.4
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 8.7e-06 53.9 123 37.4


User provided reference genes

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