Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-176 620.2 323 100.0
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.6e-95 353.6 359 61.6
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-89 332.8 379 55.9
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 6.5e-89 331.6 360 58.1
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-87 324.7 378 57.1
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-81 307.0 335 58.5
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-80 304.3 373 54.2
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-77 292.0 377 53.3
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-74 283.9 357 52.4
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-73 280.4 335 55.5
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-64 251.1 242 63.6
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-64 250.4 329 52.9
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-64 248.4 275 59.3
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-63 246.9 354 47.2
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-63 245.7 319 53.9
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-63 245.4 317 52.4
Nitab4.5_0000059g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-58 231.1 270 54.4
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-57 225.3 341 46.9
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-56 223.4 321 49.2
Nitab4.5_0000936g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-54 215.3 273 52.4
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-50 203.0 244 57.4
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-42 176.8 328 40.9
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-40 171.0 231 53.2
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-38 162.2 147 68.0
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-35 153.7 148 66.2
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-29 132.1 212 42.5
Nitab4.5_0001599g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-28 130.6 117 59.0
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-27 126.7 130 63.8
Nitab4.5_0000141g0150 Nicotiana tabacum HOM05D003911 ORTHO05D282306 1.5e-24 117.9 131 55.0
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-24 116.7 339 31.6
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-24 116.7 372 33.1
Nitab4.5_0001215g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-24 116.3 223 39.9
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-21 107.8 339 31.6
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-21 105.9 343 30.6
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-20 103.2 351 29.6
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-19 101.7 341 30.2
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-19 99.4 364 29.9
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-18 97.1 267 34.5
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-18 96.7 329 29.8
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-18 95.9 335 29.9
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-17 94.4 186 39.2
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-17 94.4 212 36.3
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-17 94.0 344 31.7
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-17 92.4 181 37.0
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-17 92.0 333 31.2
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-15 88.2 195 34.4
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-15 87.8 182 38.5
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-15 85.9 189 37.6
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-14 85.1 165 37.6
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-14 83.2 167 35.3
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 81.6 262 29.4
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 1.5e-13 81.3 239 36.4
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-13 81.3 202 35.6
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 4.5e-13 79.7 241 32.8
Nitab4.5_0000913g0150 Nicotiana tabacum HOM05D003911 ORTHO05D284303 4.5e-13 79.7 71 57.7
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-13 79.7 181 35.4
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-12 78.6 243 30.9
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-12 77.0 101 44.6
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-12 76.3 133 39.1
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-12 75.9 176 36.9
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-12 75.5 138 38.4
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-12 75.5 167 37.1
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 1.1e-11 75.1 251 28.7
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-11 75.1 352 29.0
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.1e-11 75.1 94 42.6
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-11 72.8 170 34.7
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-11 72.0 170 33.5
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-11 72.0 233 30.9
Nitab4.5_0000141g0160 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-10 71.6 95 50.5
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 70.5 145 38.6
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 70.5 145 37.2
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-10 70.1 151 35.8
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-10 69.3 68 51.5
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-09 67.8 211 33.2
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-09 67.0 167 32.9
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-09 66.6 172 31.4
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-09 66.2 156 33.3
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-09 65.9 268 28.7
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-08 64.3 111 36.9
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 64.3 60 53.3
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.5e-08 63.9 226 30.1
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-08 63.5 105 41.0
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-08 62.4 177 30.5
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-08 62.0 208 30.3
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-07 60.5 67 47.8
PGSC0003DMG400043570 Solanum tuberosum HOM05D003911 ORTHO05D002175 3.7e-07 60.1 105 42.9
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-07 59.7 117 35.0
Nitab4.5_0000481g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-07 59.7 93 41.9
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.3e-07 59.3 178 32.6
Nitab4.5_0000003g0320 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-06 58.5 41 73.2
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-06 57.8 129 30.2
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-06 57.4 259 28.6
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-06 57.4 125 32.8
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 57.4 315 24.4
CAN.G400.14 Capsicum annuum HOM05D003911 ORTHO05D001773 3.1e-06 57.0 106 40.6
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 57.0 263 28.5
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.1e-06 57.0 98 38.8
Nitab4.5_0007148g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-06 56.6 87 41.4
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.3e-06 56.2 207 29.5
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-06 55.5 101 40.6


User provided reference genes

Program Settings