Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005377g0020 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.5e-74 282.7 139 100.0
Nitab4.5_0000022g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.6e-45 184.5 143 69.2
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-33 146.7 141 55.3
Nitab4.5_0000114g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.9e-29 132.9 120 57.5
Nitab4.5_0000384g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 4.9e-25 118.2 114 57.9
Nitab4.5_0009434g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.9e-24 116.3 145 46.9
Nitab4.5_0005997g0040 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.1e-24 115.2 130 48.5
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.1e-23 112.8 141 46.8
Nitab4.5_0000001g0300 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.6e-20 103.2 109 50.5
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.6e-20 103.2 112 52.7
Nitab4.5_0028280g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.1e-20 100.9 126 46.0
Nitab4.5_0000229g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.2e-18 97.1 57 77.2
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-17 92.8 140 40.0
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.8e-17 92.0 140 39.3
Nitab4.5_0001724g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.8e-17 92.0 133 44.4
Nitab4.5_0009415g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.4e-17 90.9 131 42.0
Nitab4.5_0006538g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.5e-15 85.5 80 53.8
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.6e-15 85.1 131 36.6
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-15 85.1 140 37.9
Nitab4.5_0005190g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000482 6.0e-15 84.7 111 45.9
Nitab4.5_0000098g0180 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-14 84.0 166 30.7
Nitab4.5_0014959g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-14 84.0 131 34.4
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-14 82.8 131 42.0
Nitab4.5_0000067g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.0e-14 82.4 67 62.7
Nitab4.5_0001024g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.1e-14 81.6 61 65.6
Nitab4.5_0001914g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.7e-14 80.9 136 41.2
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-13 80.5 140 36.4
Nitab4.5_0003134g0170 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.5e-13 80.1 63 60.3
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.5e-13 80.1 63 58.7
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.9e-13 79.7 139 38.8
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.5e-13 79.3 63 60.3
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.6e-12 75.5 131 33.6
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.8e-12 75.1 124 37.9
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.2e-12 74.7 63 55.6
Nitab4.5_0000434g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.1e-12 74.3 63 57.1
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-11 73.6 119 41.2
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 1.4e-11 73.6 138 34.8
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 1.8e-11 73.2 138 34.8
Nitab4.5_0002347g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-11 72.8 63 54.0
Nitab4.5_0001114g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-11 72.4 131 32.8
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-11 72.4 124 39.5
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.9e-11 71.2 63 55.6
Nitab4.5_0008937g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.0e-11 70.9 59 54.2
Nitab4.5_0000440g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-10 70.1 134 36.6
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 1.5e-10 70.1 133 34.6
Nitab4.5_0000727g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.0e-10 69.7 57 52.6
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 3.4e-10 68.9 138 34.8
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.9e-10 67.4 140 37.1
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 9.9e-10 67.4 133 33.8
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 1.3e-09 67.0 102 37.3
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-09 67.0 121 39.7
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.9e-09 65.9 109 43.1
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 3.8e-09 65.5 142 29.6
Nitab4.5_0011140g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.8e-09 65.5 104 40.4
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.4e-09 64.7 111 40.5
Nitab4.5_0000104g0270 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.1e-08 63.9 55 58.2
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.4e-08 63.5 129 32.6
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-08 63.2 139 28.1
Nitab4.5_0000125g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-08 62.8 111 36.9
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-08 62.8 117 37.6
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 3.2e-08 62.4 131 30.5
Nitab4.5_0009593g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.2e-08 62.4 54 57.4
Solyc01g094723.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.2e-08 62.4 129 30.2
Solyc09g020160.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.2e-08 62.4 142 32.4
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 3.2e-08 62.4 139 29.5
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 4.2e-08 62.0 130 29.2
CAN.G337.146 Capsicum annuum HOM05D000679 ORTHO05D000137 4.2e-08 62.0 142 31.7
CAN.G1045.41 Capsicum annuum HOM05D000679 ORTHO05D000137 5.4e-08 61.6 131 31.3
Nitab4.5_0003201g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 5.4e-08 61.6 98 39.8
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 7.1e-08 61.2 129 30.2
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 7.1e-08 61.2 140 29.3
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 7.1e-08 61.2 140 29.3
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 7.1e-08 61.2 140 29.3
CAN.G1089.23 Capsicum annuum HOM05D000679 ORTHO05D000137 9.3e-08 60.8 142 28.2
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 9.3e-08 60.8 138 32.6
CAN.G1659.8 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-07 60.5 129 31.8
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-07 60.5 113 38.1
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 1.2e-07 60.5 140 30.7
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.6e-07 60.1 106 36.8
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.6e-07 60.1 140 30.0
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 2.1e-07 59.7 131 29.8
CAN.G358.114 Capsicum annuum HOM05D000679 ORTHO05D000137 2.1e-07 59.7 142 30.3
CAN.G874.53 Capsicum annuum HOM05D000679 ORTHO05D000137 2.1e-07 59.7 142 28.2
Nitab4.5_0021924g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.1e-07 59.7 63 52.4
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 2.7e-07 59.3 139 26.6
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.7e-07 59.3 114 33.3
Solyc07g008677.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.7e-07 59.3 140 28.6
Sopen09g029010 Solanum pennellii HOM05D000679 ORTHO05D000137 2.7e-07 59.3 139 27.3
Nitab4.5_0000125g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.5e-07 58.9 60 48.3
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-07 58.9 141 28.4
Sopen01g028110 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-07 58.9 136 30.1
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-07 58.9 139 27.3
CAN.G453.11 Capsicum annuum HOM05D000679 ORTHO05D000137 4.6e-07 58.5 133 32.3
CAN.G633.6 Capsicum annuum HOM05D000679 ORTHO05D000137 4.6e-07 58.5 142 30.3
Solyc05g150115.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 4.6e-07 58.5 141 31.9
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 4.6e-07 58.5 136 31.6
PGSC0003DMG400023044 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.6e-07 58.5 134 29.9
CAN.G126.27 Capsicum annuum HOM05D000679 ORTHO05D000137 6.0e-07 58.2 142 29.6
CAN.G1266.2 Capsicum annuum HOM05D000679 ORTHO05D000137 6.0e-07 58.2 142 27.5
CAN.G43.27 Capsicum annuum HOM05D000679 ORTHO05D000137 6.0e-07 58.2 133 31.6
Nitab4.5_0000409g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.0e-07 58.2 50 58.0
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.0e-07 58.2 64 45.3
Sopen03g006990 Solanum pennellii HOM05D000679 ORTHO05D000137 6.0e-07 58.2 140 29.3
Sopen06g003810 Solanum pennellii HOM05D000679 ORTHO05D000137 6.0e-07 58.2 130 30.0
Nitab4.5_0007888g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.9e-07 57.8 99 37.4
CAN.G257.82 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-06 57.4 136 28.7
CAN.G43.14 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-06 57.4 149 29.5
CAN.G546.31 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-06 57.4 142 28.9
Nitab4.5_0000403g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-06 57.4 121 33.1
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-06 57.4 131 29.8
Nitab4.5_0003525g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.0e-06 57.4 64 50.0
Solyc03g034332.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.0e-06 57.4 124 31.5
Sopen05g008210 Solanum pennellii HOM05D000679 ORTHO05D000137 1.0e-06 57.4 133 31.6
Sopen05g010340 Solanum pennellii HOM05D000679 ORTHO05D000137 1.0e-06 57.4 128 28.9
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.0e-06 57.4 133 30.1
Nitab4.5_0001317g0150 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.3e-06 57.0 118 34.7
Sopen07g015500 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-06 57.0 133 31.6
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 1.7e-06 56.6 134 27.6
Nitab4.5_0004809g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-06 56.6 65 40.0
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-06 56.6 141 29.8
Solyc08g014618.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.7e-06 56.6 140 28.6
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 1.7e-06 56.6 139 26.6
Sopen07g013180 Solanum pennellii HOM05D000679 ORTHO05D000137 1.7e-06 56.6 133 30.8
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 2.3e-06 56.2 135 30.4
CAN.G649.11 Capsicum annuum HOM05D000679 ORTHO05D000137 2.3e-06 56.2 139 30.9
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 3.0e-06 55.8 133 27.1
CAN.G572.43 Capsicum annuum HOM05D000679 ORTHO05D000137 3.0e-06 55.8 142 28.2
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 3.0e-06 55.8 124 29.0
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-06 55.8 61 47.5
Nitab4.5_0004407g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.0e-06 55.8 50 54.0
Sopen04g032900 Solanum pennellii HOM05D000679 ORTHO05D000137 3.0e-06 55.8 133 30.8
Sopen05g008010 Solanum pennellii HOM05D000679 ORTHO05D000137 3.0e-06 55.8 133 30.8
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.0e-06 55.8 142 23.9
CAN.G1037.8 Capsicum annuum HOM05D000679 ORTHO05D000137 3.9e-06 55.5 129 31.0
CAN.G105.2 Capsicum annuum HOM05D000679 ORTHO05D000137 3.9e-06 55.5 142 27.5
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.9e-06 55.5 99 40.4
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-06 55.5 131 29.8
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-06 55.5 135 27.4
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.1e-06 55.1 57 49.1
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 5.1e-06 55.1 136 29.4
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 6.6e-06 54.7 138 27.5
CAN.G1541.2 Capsicum annuum HOM05D000679 ORTHO05D000137 6.6e-06 54.7 142 30.3
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.6e-06 54.7 130 30.0
Sopen09g012220 Solanum pennellii HOM05D000679 ORTHO05D000137 6.6e-06 54.7 133 30.1
Nitab4.5_0000034g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.7e-06 54.3 53 41.5


User provided reference genes

Program Settings