Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005345g0030 Nicotiana tabacum HOM05D005594 ORTHO05D006403 3.1e-72 275.0 139 100.0
Nitab4.5_0000131g0040 Nicotiana tabacum HOM05D005594 ORTHO05D006403 1.1e-37 160.2 133 70.7
Nitab4.5_0009755g0010 Nicotiana tabacum HOM05D005594 ORTHO05D006403 6.4e-33 144.4 81 93.8
PGSC0003DMG400008701 Solanum tuberosum HOM05D005594 ORTHO05D006403 1.8e-27 126.3 82 82.9
Sopen04g030280 Solanum pennellii HOM05D005594 ORTHO05D006403 8.9e-27 124.0 82 81.7
Peaxi162Scf01112g00131 Petunia axillaris HOM05D005594 ORTHO05D006403 5.8e-26 121.3 82 81.7
Solyc04g076560.3 Solanum lycopersicum HOM05D005594 ORTHO05D006403 7.6e-26 120.9 82 80.5
CAN.G193.4 Capsicum annuum HOM05D005594 ORTHO05D006403 2.1e-23 112.8 80 77.5
Ciclev10001834m.g Citrus clementina HOM05D005594 ORTHO05D006403 5.1e-22 108.2 78 70.5
Oeu040880.1 Olea europaea HOM05D005594 ORTHO05D006403 1.1e-21 107.1 79 74.7
vmacro21357 Vaccinium macrocarpon HOM05D005594 ORTHO05D006403 1.9e-21 106.3 83 68.7
Dinv42597 Davidia involucrata HOM05D005594 ORTHO05D006403 1.2e-20 103.6 89 62.9
CSS0014517 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 3.6e-20 102.1 78 71.8
CSS0029582 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 3.6e-20 102.1 78 71.8
CiPaw.01G111900 Carya illinoinensis HOM05D005594 ORTHO05D006403 3.6e-20 102.1 80 68.8
CiPaw.07G163500 Carya illinoinensis HOM05D005594 ORTHO05D006403 3.6e-20 102.1 79 69.6
Duzib093G1195 Durio zibethinus HOM05D005594 ORTHO05D006403 4.7e-20 101.7 79 68.4
Atru.chr13.987 Acer truncatum HOM05D005594 ORTHO05D006403 8.1e-20 100.9 91 58.2
Gohir.D05G221400 Gossypium hirsutum HOM05D005594 ORTHO05D006403 8.1e-20 100.9 79 69.6
Gorai.009G228600 Gossypium raimondii HOM05D005594 ORTHO05D006403 8.1e-20 100.9 79 69.6
COL.COLO4_35271 Corchorus olitorius HOM05D005594 ORTHO05D006403 1.8e-19 99.8 79 67.1
GSVIVG01009200001 Vitis vinifera HOM05D005594 ORTHO05D006403 1.8e-19 99.8 80 67.5
SalBow3G3026 Salvia bowleyana HOM05D005594 ORTHO05D006403 3.1e-19 99.0 86 64.0
Rhsim06G0070100 Rhododendron simsii HOM05D005594 ORTHO05D006403 6.8e-19 97.8 126 52.4
TWI31G0793 Tripterygium wilfordii HOM05D005594 ORTHO05D006403 8.9e-19 97.4 78 67.9
Thecc.08G073300 Theobroma cacao HOM05D005594 ORTHO05D006403 2.0e-18 96.3 79 65.8
Gohir.A05G218700 Gossypium hirsutum HOM05D005594 ORTHO05D006403 2.6e-18 95.9 79 67.1
Oeu034716.2 Olea europaea HOM05D005594 ORTHO05D006403 3.4e-18 95.5 66 78.8
SGA_v2.0_scaffold13G06499 Striga asiatica HOM05D005594 ORTHO05D006403 3.4e-18 95.5 81 67.9
unitig_26.g9553 Utricularia gibba HOM05D005594 ORTHO05D006403 3.4e-18 95.5 79 67.1
Eucgr.F02158 Eucalyptus grandis HOM05D005594 ORTHO05D006403 7.6e-18 94.4 79 68.4
Rhsim05G0205900 Rhododendron simsii HOM05D005594 ORTHO05D006403 7.6e-18 94.4 80 67.5
CANSAT35G1072 Cannabis sativa HOM05D005594 ORTHO05D006403 1.3e-17 93.6 78 65.4
Haze_22483 Corylus avellana HOM05D005594 ORTHO05D006403 1.3e-17 93.6 79 65.8
SGA_v2.0_scaffold62G21352 Striga asiatica HOM05D000582 ORTHO05D006403 1.7e-17 93.2 81 67.9
Actinidia19620 Actinidia chinensis HOM05D005594 ORTHO05D006403 2.2e-17 92.8 78 64.1
TAR625G0360 Trochodendron aralioides HOM05D005594 ORTHO05D006403 2.2e-17 92.8 80 63.8
MSTRG.24680 Avicennia marina HOM05D005594 ORTHO05D006403 3.8e-17 92.0 79 64.6
FAN08G3514 Fragaria x ananassa HOM05D005594 ORTHO05D006403 4.9e-17 91.7 81 59.3
Manes.18G056600 Manihot esculenta HOM05D005594 ORTHO05D006403 6.4e-17 91.3 75 65.3
QL12p040902 Quercus lobata HOM05D005594 ORTHO05D006403 6.4e-17 91.3 77 66.2
QL09p018366 Quercus lobata HOM05D005594 ORTHO05D006403 8.4e-17 90.9 77 64.9
GSVIVG01026918001 Vitis vinifera HOM05D005594 ORTHO05D006403 1.1e-16 90.5 77 63.6
Cc10_g08520 Coffea canephora HOM05D005594 ORTHO05D006403 1.4e-16 90.1 79 64.6
MBI16_g06011_MAGBIO Magnolia biondii HOM05D005594 ORTHO05D006403 1.4e-16 90.1 78 62.8
ClCG02G008140 Citrullus lanatus HOM05D005594 ORTHO05D006403 1.9e-16 89.7 80 61.2
MELO3C003509.2 Cucumis melo HOM05D005594 ORTHO05D006403 4.2e-16 88.6 79 60.8
MD08G1202600 Malus domestica HOM05D005594 ORTHO05D006403 4.2e-16 88.6 79 62.0
TAR381G1609 Trochodendron aralioides HOM05D005594 ORTHO05D006403 5.4e-16 88.2 81 60.5
Glyma.06G098500 Glycine max HOM05D005594 ORTHO05D006403 9.3e-16 87.4 79 62.0
MD15G1388800 Malus domestica HOM05D005594 ORTHO05D006403 9.3e-16 87.4 81 59.3
PGR042G0833 Punica granatum HOM05D005594 ORTHO05D006403 9.3e-16 87.4 75 64.0
Prupe.1G535400 Prunus persica HOM05D005594 ORTHO05D006403 1.2e-15 87.0 80 60.0
MD08G1202000 Malus domestica HOM05D005594 ORTHO05D006403 1.6e-15 86.7 79 60.8
Nn1g05624 Nelumbo nucifera HOM05D005594 ORTHO05D006403 1.6e-15 86.7 79 59.5
CsaV3_3G048080 Cucumis sativus L. HOM05D005594 ORTHO05D006403 2.1e-15 86.3 79 59.5
Glyma.04G096700 Glycine max HOM05D005594 ORTHO05D006403 2.1e-15 86.3 79 62.0
Sed0005434 Sechium edule HOM05D005594 ORTHO05D006403 4.6e-15 85.1 79 59.5
FvH4_5g34380 Fragaria vesca HOM05D005594 ORTHO05D006403 7.8e-15 84.3 69 60.9
FAN18G0194 Fragaria x ananassa HOM05D005594 ORTHO05D006403 7.8e-15 84.3 69 60.9
Migut.N00274 Erythranthe guttata HOM05D005594 ORTHO05D006403 1.0e-14 84.0 80 58.8
PSO170G0052 Papaver somniferum HOM05D005594 ORTHO05D006403 1.7e-14 83.2 77 61.0
PSO541G2296 Papaver somniferum HOM05D005594 ORTHO05D006403 2.3e-14 82.8 77 58.4
Lj8A490G28 Lonicera japonica HOM05D005594 ORTHO05D006403 3.0e-14 82.4 77 58.4
Lj8A496G24 Lonicera japonica HOM05D005594 ORTHO05D006403 3.0e-14 82.4 77 58.4
PSO675G6381 Papaver somniferum HOM05D005594 ORTHO05D006403 3.0e-14 82.4 77 58.4
Potri.005G152200 Populus trichocarpa HOM05D005594 ORTHO05D006403 3.0e-14 82.4 77 59.7
THA.LOC104800630 Tarenaya hassleriana HOM05D005594 ORTHO05D006403 1.1e-13 80.5 79 58.2
Lj4g0023762 Lotus japonicus HOM05D005594 ORTHO05D006403 1.5e-13 80.1 83 59.0
Sabra05G0119000 Salix brachista HOM05D005594 ORTHO05D006403 1.5e-13 80.1 77 58.4
Sc15g0003090 Simmondsia chinensis HOM05D005594 ORTHO05D006403 1.5e-13 80.1 78 57.7
Phvul.009G035100 Phaseolus vulgaris HOM05D005594 ORTHO05D006403 1.9e-13 79.7 79 58.2
Hund26823 Selenicereus undatus HOM05D005594 ORTHO05D006403 1.9e-13 79.7 79 58.2
EL10Ac1g00491 Beta vulgaris HOM05D005594 ORTHO05D006403 2.5e-13 79.3 78 59.0
FAN04G0064 Fragaria x ananassa HOM05D005594 ORTHO05D006403 3.3e-13 79.0 65 60.0
VMungo1309G0327 Vigna mungo HOM05D005594 ORTHO05D006403 3.3e-13 79.0 82 56.1
Lsat_1_v5_gn_3_110060 Lactuca sativa HOM05D005594 ORTHO05D006403 5.6e-13 78.2 91 52.7
TPR.G6332 Trifolium pratense HOM05D005594 ORTHO05D006403 5.6e-13 78.2 79 54.4
RcHm_v2.0_Chr7g0234971 Rosa chinensis HOM05D005594 ORTHO05D006403 7.3e-13 77.8 87 49.4
HPP92_001778 Vanilla planifolia HOM05D005594 ORTHO05D006403 1.3e-12 77.0 81 58.0
Lj1g0021697 Lotus japonicus HOM05D005594 ORTHO05D006403 2.1e-12 76.3 79 59.5
Lalb_Chr23g0269971 Lupinus albus HOM05D005594 ORTHO05D006403 3.6e-12 75.5 79 54.4
arahy.Tifrunner.gnm1.ann1.X1J0TB Arachis hypogaea HOM05D005594 ORTHO05D006403 4.8e-12 75.1 89 49.4
arahy.Tifrunner.gnm1.ann1.7TC8PB Arachis hypogaea HOM05D005594 ORTHO05D006403 8.1e-12 74.3 79 53.2
CDE02G1340 Ceratophyllum demersum HOM05D005594 ORTHO05D006403 1.8e-11 73.2 80 52.5
HanXRQChr09g0253981 Helianthus annuus HOM05D005594 ORTHO05D006403 1.8e-11 73.2 78 52.6
DCAR_028088 Daucus carota HOM05D005594 ORTHO05D006403 2.4e-11 72.8 78 50.0
Ah.07g203840 Amaranthus hybridus HOM05D005594 ORTHO05D006403 3.1e-11 72.4 78 51.3
ECA248G0412 Erigeron canadensis HOM05D005594 ORTHO05D006403 9.0e-11 70.9 78 47.4
Medtr3g099850 Medicago truncatula HOM05D005594 ORTHO05D006403 1.2e-10 70.5 79 48.1
SEGI_07360 Sequoiadendron giganteum HOM05D005594 ORTHO05D006403 1.5e-10 70.1 81 51.9
Cpa.g.sc1556.4 Carica papaya HOM05D005594 ORTHO05D006403 4.4e-10 68.6 78 55.1
ATR0767G044 Amborella trichopoda HOM05D005594 ORTHO05D006403 5.8e-10 68.2 80 48.8
Ca_11286_v3 Cicer arietinum L. HOM05D005594 ORTHO05D006403 5.8e-10 68.2 81 48.1
Ca_26381_v3 Cicer arietinum L. HOM05D005594 ORTHO05D006403 5.8e-10 68.2 81 48.1
Psat5g049560 Pisum sativum HOM05D005594 ORTHO05D006403 7.6e-10 67.8 67 53.7
Aqoxy4G03011 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 2.2e-09 66.2 61 55.7
Aa31LG1G6880 Aethionema arabicum HOM05D005594 ORTHO05D006403 1.4e-08 63.5 80 45.0
Aqoxy5G01356 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 1.4e-08 63.5 51 60.8
HanXRQChr15g0472131 Helianthus annuus HOM05D005594 ORTHO05D006403 1.4e-08 63.5 98 40.8
AUR62014367 Chenopodium quinoa HOM05D005594 ORTHO05D006403 5.4e-08 61.6 78 50.0
Pp3c26_12080 Physcomitrium patens HOM05D005594 ORTHO05D006403 5.4e-08 61.6 81 44.4
AagrBONN_evm.TU.Sc2ySwM_117.2374 Anthoceros agrestis HOM05D005594 ORTHO05D006403 2.1e-07 59.7 50 56.0
PSO017G1526 Papaver somniferum HOM05D005594 ORTHO05D006403 2.1e-07 59.7 79 45.6
AUR62019109 Chenopodium quinoa HOM05D005594 ORTHO05D006403 2.7e-07 59.3 58 56.9
CiPaw.01G112000 Carya illinoinensis HOM05D005594 ORTHO05D006403 5.1e-06 55.1 36 77.8
AagrBONN_evm.TU.Sc2ySwM_228.4407 Anthoceros agrestis HOM05D005056 ORTHO05D006403 8.7e-06 54.3 50 52.0


User provided reference genes

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