Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 7.7e-98 360.5 190 100.0
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 2.6e-77 292.4 194 85.6
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 4.6e-74 281.6 210 76.2
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 4.0e-70 268.5 193 77.2
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 7.6e-69 264.2 193 76.7
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 1.1e-62 243.8 204 69.1
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 1.8e-62 243.0 199 69.8
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 2.6e-61 239.2 204 67.6
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 3.4e-61 238.8 202 68.8
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 1.3e-60 236.9 202 64.9
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 2.2e-60 236.1 221 62.9
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 3.8e-60 235.3 209 68.4
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 8.4e-60 234.2 205 65.9
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.1e-59 233.8 202 66.8
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 9.3e-59 230.7 201 67.2
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 1.2e-58 230.3 204 66.2
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 1.6e-58 229.9 217 63.1
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 1.6e-58 229.9 189 69.8
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 2.1e-58 229.6 205 66.3
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 2.7e-58 229.2 202 64.4
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 3.5e-58 228.8 202 65.3
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 3.5e-58 228.8 205 63.9
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 1.3e-57 226.9 203 64.5
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 3.0e-57 225.7 210 64.8
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 3.0e-57 225.7 202 64.9
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 1.9e-56 223.0 221 62.4
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 2.5e-56 222.6 206 64.6
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 3.3e-56 222.2 211 62.1
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 4.3e-56 221.9 219 62.6
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 4.3e-56 221.9 203 65.0
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 5.6e-56 221.5 217 62.2
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 9.6e-56 220.7 229 58.1
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 2.8e-55 219.2 212 63.2
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 8.1e-55 217.6 200 65.0
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 1.4e-54 216.9 222 59.5
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 1.8e-54 216.5 200 65.0
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 3.1e-54 215.7 203 61.1
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 9.0e-54 214.2 215 60.5
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 1.5e-53 213.4 207 63.3
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 2.6e-53 212.6 229 58.1
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 5.8e-53 211.5 203 60.1
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 4.9e-52 208.4 191 64.9
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 6.4e-52 208.0 218 58.3
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 8.4e-52 207.6 205 61.5
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 8.4e-52 207.6 167 70.1
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 1.1e-51 207.2 149 75.8
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 2.4e-51 206.1 170 69.4
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 1.6e-50 203.4 226 56.6
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 1.6e-50 203.4 190 62.6
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 2.1e-50 203.0 197 59.9
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 6.0e-50 201.4 190 64.7
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 7.9e-50 201.1 216 60.2
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 1.3e-49 200.3 217 56.7
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 2.3e-49 199.5 225 57.8
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 3.0e-49 199.1 256 50.4
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 6.6e-49 198.0 220 56.8
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 1.1e-48 197.2 218 58.3
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 1.1e-48 197.2 214 60.3
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 1.5e-48 196.8 222 55.9
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 7.3e-48 194.5 195 61.0
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.3e-47 193.7 215 54.4
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 6.2e-47 191.4 210 54.3
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 1.8e-46 189.9 209 59.3
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 1.1e-43 180.6 160 66.9
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 1.1e-40 170.6 210 53.8
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 1.1e-40 170.6 179 57.0
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 1.1e-40 170.6 193 53.9
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 1.9e-40 169.9 200 52.5
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 3.3e-40 169.1 169 62.1
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 2.8e-39 166.0 158 62.0
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 3.7e-39 165.6 212 51.9
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 2.4e-38 162.9 191 53.9
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 6.9e-38 161.4 196 54.6
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 9.0e-38 161.0 162 61.7
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.5e-37 160.2 98 85.7
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.5e-37 160.2 86 93.0
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 2.0e-37 159.8 160 61.2
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.0e-37 159.8 86 93.0
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 2.6e-37 159.5 86 91.9
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 2.6e-37 159.5 164 62.8
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 2.6e-37 159.5 86 93.0
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 4.5e-37 158.7 86 91.9
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 4.5e-37 158.7 86 93.0
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 7.6e-37 157.9 178 57.9
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 1.0e-36 157.5 86 91.9
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 1.0e-36 157.5 86 91.9
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 1.3e-36 157.1 175 57.1
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 1.3e-36 157.1 86 91.9
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 2.2e-36 156.4 87 94.3
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 4.9e-36 155.2 165 58.2
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 8.4e-36 154.5 174 58.6
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.1e-34 149.8 158 59.5
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 2.7e-34 149.4 88 89.8
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 1.0e-33 147.5 86 83.7
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 8.7e-33 144.4 128 63.3
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 5.7e-32 141.7 133 63.9
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 1.4e-30 137.1 197 47.7
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 2.9e-28 129.4 163 50.9
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 6.5e-28 128.3 267 40.8
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 4.2e-27 125.6 272 39.7
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 7.2e-27 124.8 278 38.5
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 3.0e-25 119.4 113 59.3
Sopen06g028430 Solanum pennellii HOM05D005752 ORTHO05D006959 4.3e-24 115.5 104 67.3
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 4.8e-23 112.1 233 40.3
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 6.3e-23 111.7 94 69.1
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 1.4e-22 110.5 299 36.5
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 6.9e-22 108.2 64 84.4
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 2.2e-20 103.2 96 64.6
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 2.2e-20 103.2 150 47.3
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 8.8e-17 91.3 170 39.4
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 1.5e-16 90.5 194 36.1
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 5.7e-16 88.6 45 95.6
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 2.2e-15 86.7 144 47.9
Peaxi162Scf00171g00037 Petunia axillaris HOM05D005752 ORTHO05D006959 1.8e-14 83.6 81 60.5
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 2.4e-14 83.2 278 32.7
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 3.1e-14 82.8 105 51.4
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 3.1e-14 82.8 105 51.4
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 4.1e-14 82.4 142 46.5
BcaC08g45649 Brassica carinata HOM05D005752 ORTHO05D006959 2.0e-13 80.1 116 50.9
FAN13G1309 Fragaria x ananassa HOM05D005752 ORTHO05D006959 1.7e-12 77.0 107 49.5
Cpa.g.sc628.6 Carica papaya HOM05D005752 ORTHO05D006959 1.1e-11 74.3 141 41.8
SGA_v2.0_scaffold25G10718 Striga asiatica HOM05D005752 ORTHO05D006959 1.1e-11 74.3 105 47.6
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 1.1e-11 74.3 41 87.8
HanXRQChr04g0126301 Helianthus annuus HOM05D005752 ORTHO05D006959 1.6e-10 70.5 42 83.3
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 4.7e-10 68.9 42 78.6
CDE04G3305 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 2.3e-09 66.6 129 41.1
Lalb_Chr14g0370141 Lupinus albus HOM05D005752 ORTHO05D006959 1.1e-08 64.3 63 55.6
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 2.0e-08 63.5 41 80.5
Cc00_g01560 Coffea canephora HOM05D005752 ORTHO05D006959 9.7e-08 61.2 82 45.1
SHI05872 Sapria himalayana HOM05D005752 ORTHO05D006959 9.7e-08 61.2 81 50.6
CsaV3_1G005260 Cucumis sativus L. HOM05D005752 ORTHO05D006959 4.1e-06 55.8 82 47.6


User provided reference genes

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