Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005310g0050 Nicotiana tabacum HOM05D011353 ORTHO05D014734 6.0e-77 290.8 151 100.0
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 1.7e-31 139.8 151 57.6
Nitab4.5_0000149g0140 Nicotiana tabacum HOM05D011353 ORTHO05D009802 1.7e-31 139.8 112 72.3
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 3.6e-29 132.1 149 53.7
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 4.8e-26 121.7 156 51.3
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 8.2e-26 120.9 156 52.6
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 1.8e-25 119.8 156 51.3
Nitab4.5_0010998g0060 Nicotiana tabacum HOM05D011353 ORTHO05D009802 1.8e-20 103.2 130 48.5
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 1.3e-18 97.1 135 46.7
Nitab4.5_0000027g0500 Nicotiana tabacum HOM05D011353 ORTHO05D009802 2.6e-16 89.4 128 44.5
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 5.9e-16 88.2 151 41.7
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 1.7e-15 86.7 138 43.5
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 2.0e-11 73.2 137 40.9
Potri.008G113800 Populus trichocarpa HOM05D018804 ORTHO05D013371 6.3e-10 68.2 122 45.1
Sabra10G0103600 Salix brachista HOM05D018804 ORTHO05D013371 6.3e-10 68.2 151 40.4
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 8.2e-10 67.8 153 37.9
FAN07G0328 Fragaria x ananassa HOM05D014692 ORTHO05D014734 8.2e-10 67.8 137 40.9
Ciclev10013380m.g Citrus clementina HOM05D008889 ORTHO05D009956 1.4e-09 67.0 123 36.6
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 1.4e-09 67.0 97 46.4
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 2.4e-09 66.2 97 46.4
Actinidia30176 Actinidia chinensis HOM05D011353 ORTHO05D009802 3.1e-09 65.9 148 38.5
Potri.010G134800 Populus trichocarpa HOM05D018804 ORTHO05D013371 4.1e-09 65.5 154 39.6
FAN17G2419 Fragaria x ananassa HOM05D014692 ORTHO05D014734 7.0e-09 64.7 137 40.1
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 7.0e-09 64.7 118 38.1
Sabra08G0086100 Salix brachista HOM05D018804 ORTHO05D013371 1.2e-08 63.9 120 41.7
FvH4_4g28720 Fragaria vesca HOM05D014692 ORTHO05D014734 2.0e-08 63.2 137 40.1
FAN12G1660 Fragaria x ananassa HOM05D014692 ORTHO05D014734 2.0e-08 63.2 137 40.1
FAN22G0750 Fragaria x ananassa HOM05D014692 ORTHO05D014734 2.0e-08 63.2 115 40.0
ECA246G0644 Erigeron canadensis HOM05D009227 ORTHO05D009956 2.7e-08 62.8 162 37.7
Lsat_1_v5_gn_0_39381 Lactuca sativa HOM05D001719 ORTHO05D008373 2.7e-08 62.8 137 40.1
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 3.5e-08 62.4 154 37.0
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 5.9e-08 61.6 106 40.6
Actinidia35060 Actinidia chinensis HOM05D014692 ORTHO05D014734 7.7e-08 61.2 79 49.4
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 3.8e-07 58.9 151 35.1
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 5.0e-07 58.5 82 48.8
Manes.14G093100 Manihot esculenta HOM05D018804 ORTHO05D014734 6.5e-07 58.2 125 42.4
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 6.5e-07 58.2 138 37.7
Prupe.1G298800 Prunus persica HOM05D014692 ORTHO05D014734 1.1e-06 57.4 152 36.8
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 1.5e-06 57.0 106 37.7
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 2.5e-06 56.2 149 34.2
Aqoxy3G03789 Aquilegia oxysepala HOM05D018804 ORTHO05D009802 2.5e-06 56.2 134 37.3
Lj2g0023718 Lotus japonicus HOM05D018202 ORTHO05D020778 2.5e-06 56.2 151 35.8
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 3.2e-06 55.8 85 44.7
COL.COLO4_27749 Corchorus olitorius HOM05D018013 ORTHO05D013371 4.2e-06 55.5 126 35.7
Migut.E00267 Erythranthe guttata HOM05D011353 ORTHO05D009956 4.2e-06 55.5 148 35.1
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.5e-06 55.1 148 35.1
CSS0028308 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 7.2e-06 54.7 135 35.6
Duzib268G0584 Durio zibethinus HOM05D018013 ORTHO05D013371 7.2e-06 54.7 151 37.7
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 7.2e-06 54.7 101 41.6
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 7.2e-06 54.7 80 46.2


User provided reference genes

Program Settings