Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005287g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.9e-119 430.6 214 100.0
Nitab4.5_0003803g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.5e-85 317.4 214 79.4
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.7e-66 254.6 275 55.3
Nitab4.5_0004219g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.3e-64 250.4 214 65.4
Nitab4.5_0000260g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.3e-64 248.1 276 54.3
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-62 243.0 170 77.1
Nitab4.5_0001246g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.5e-60 236.1 289 52.6
Nitab4.5_0002309g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-56 222.6 162 73.5
Nitab4.5_0003657g0010 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.7e-54 216.1 199 64.8
Nitab4.5_0002128g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.5e-54 215.3 164 73.8
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-52 210.3 204 58.3
Nitab4.5_0004837g0080 Nicotiana tabacum HOM05D000045 ORTHO05D002701 7.2e-52 208.0 234 50.4
Nitab4.5_0001168g0180 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.0e-50 202.2 279 49.1
Nitab4.5_0008840g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.7e-48 195.7 152 73.0
Nitab4.5_0001021g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-47 194.1 109 87.2
Nitab4.5_0000216g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.1e-47 192.2 109 86.2
Nitab4.5_0011485g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.8e-45 185.7 143 73.4
Nitab4.5_0000987g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.0e-45 185.3 111 82.0
Nitab4.5_0001569g0200 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-41 172.9 170 57.6
Nitab4.5_0003552g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-41 172.6 122 72.1
Nitab4.5_0001727g0190 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.4e-40 168.3 109 76.1
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.0e-39 164.9 92 87.0
Nitab4.5_0002714g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-38 162.9 170 60.0
Nitab4.5_0008768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.9e-38 161.8 154 61.0
Nitab4.5_0007742g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-37 160.6 92 84.8
Nitab4.5_0002333g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-37 160.2 154 65.6
Nitab4.5_0000108g0430 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-36 156.8 92 81.5
Nitab4.5_0000025g0270 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-35 153.3 271 36.2
Nitab4.5_0009727g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.2e-35 151.8 162 58.6
Nitab4.5_0001106g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-33 147.5 291 35.1
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-33 144.8 92 79.3
Nitab4.5_0004232g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-31 140.6 139 62.6
Nitab4.5_0003145g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.0e-29 132.1 178 46.1
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-28 129.8 161 46.6
Nitab4.5_0000440g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.3e-28 128.3 106 66.0
Nitab4.5_0003351g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.3e-28 128.3 91 71.4
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.5e-28 127.9 178 44.4
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-27 126.7 151 44.4
Nitab4.5_0003370g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-27 126.3 164 42.1
Nitab4.5_0000669g0150 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.2e-27 125.2 109 52.3
Nitab4.5_0002145g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.1e-27 124.8 163 42.3
Nitab4.5_0013768g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-26 123.2 109 51.4
Nitab4.5_0002753g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-26 122.9 164 41.5
Nitab4.5_0002791g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-25 120.9 247 36.0
Nitab4.5_0003364g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-25 119.8 151 55.6
Nitab4.5_0000391g0230 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.4e-25 119.4 172 39.5
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-25 119.4 165 40.0
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.4e-25 119.0 165 44.8
Nitab4.5_0004091g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.8e-25 118.6 161 42.2
Nitab4.5_0006574g0110 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.8e-25 118.6 171 43.3
Nitab4.5_0000782g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-25 118.2 166 42.2
Nitab4.5_0006220g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-25 118.2 189 40.7
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.3e-24 114.8 167 44.3
Nitab4.5_0002782g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.3e-24 114.8 279 29.4
Nitab4.5_0000307g0230 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-23 113.6 82 72.0
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.1e-23 112.5 187 38.0
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-22 109.8 98 52.0
Nitab4.5_0006745g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.5e-22 109.4 277 31.0
Nitab4.5_0001488g0190 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-21 107.1 166 38.6
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.0e-21 106.3 138 45.7
Nitab4.5_0014556g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.0e-21 106.3 92 53.3
CAN.G490.39 Capsicum annuum HOM05D000045 ORTHO05D002701 5.1e-21 105.5 245 31.8
Nitab4.5_0003611g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.5e-20 104.0 288 28.5
Nitab4.5_0012491g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-19 100.5 72 68.1
Nitab4.5_0004193g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.2e-19 98.6 134 44.0
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.3e-18 96.7 185 33.5
Nitab4.5_0005781g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-18 96.3 162 39.5
Nitab4.5_0000092g0160 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-17 92.8 230 30.9
Nitab4.5_0002386g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.4e-17 92.4 148 36.5
Nitab4.5_0003314g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-16 90.5 144 51.4
Nitab4.5_0006902g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-16 89.7 164 34.8
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.4e-16 88.2 156 39.1
Nitab4.5_0004798g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.4e-16 88.2 118 44.9
Nitab4.5_0002449g0090 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-15 87.0 94 59.6
Nitab4.5_0000188g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.1e-15 85.1 153 35.3
CAN.G69.26 Capsicum annuum HOM05D004033 ORTHO05D002701 1.6e-14 84.0 122 35.2
CAN.G636.2 Capsicum annuum HOM05D004033 ORTHO05D002701 2.7e-14 83.2 153 33.3
Nitab4.5_0005934g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-13 80.5 109 35.8
Nitab4.5_0000136g0230 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.0e-13 79.7 117 41.9
CAN.G770.3 Capsicum annuum HOM05D004033 ORTHO05D002701 3.9e-13 79.3 151 34.4
Nitab4.5_0002906g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.6e-13 78.2 72 66.7
CAN.G14674.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.1e-12 77.8 92 42.4
CAN.G1700.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.5e-12 77.4 92 42.4
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 7.3e-12 75.1 99 38.4
CAN.G2043.1 Capsicum annuum HOM05D000045 ORTHO05D002701 1.2e-11 74.3 153 32.0
CAN.G2880.1 Capsicum annuum HOM05D000045 ORTHO05D002701 1.2e-11 74.3 153 32.0
Nitab4.5_0024535g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-11 73.6 52 67.3
Nitab4.5_0000583g0300 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-11 73.2 105 41.0
Nitab4.5_0006220g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.1e-11 71.6 55 72.7
Nitab4.5_0012426g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.9e-10 68.6 60 50.0
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 8.9e-10 68.2 220 25.5
CAN.G183.20 Capsicum annuum HOM05D004033 ORTHO05D002701 8.9e-10 68.2 87 36.8
Nitab4.5_0001219g0110 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-09 67.8 62 51.6
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-09 67.4 127 34.6
CiPaw.09G196800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.5e-09 67.4 173 27.2
TWI60G1535 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-09 67.0 129 31.8
CAN.G98.5 Capsicum annuum HOM05D000045 ORTHO05D002701 2.6e-09 66.6 107 33.6
CiPaw.01G259100 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.4e-09 65.9 197 27.4
Nitab4.5_0004578g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.8e-09 65.5 75 60.0
Nitab4.5_0000127g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 7.6e-09 65.1 130 32.3
Nitab4.5_0003167g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.6e-09 65.1 37 78.4
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.6e-09 65.1 118 32.2
CAN.G185.9 Capsicum annuum HOM05D004033 ORTHO05D002701 1.3e-08 64.3 107 31.8
CAN.G2002.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.3e-08 64.3 115 29.6
Migut.A01062 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.7e-08 63.9 80 40.0
TWI15G0461 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-08 63.5 118 31.4
PSO017G2907 Papaver somniferum HOM05D000045 ORTHO05D000067 3.8e-08 62.8 154 29.9
Aqoxy2G00230 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 6.4e-08 62.0 95 34.7
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 1.1e-07 61.2 78 38.5
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-07 61.2 118 30.5
CSS0028932 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-07 60.8 124 29.8
TWI79G1737 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-07 60.5 144 29.2
CiPaw.16G024000 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.4e-07 60.1 183 25.1
Glyma.06G002400 Glycine max HOM05D000045 ORTHO05D000067 2.4e-07 60.1 188 26.6
Peaxi162Scf00008g02313 Petunia axillaris HOM05D004033 ORTHO05D002701 2.4e-07 60.1 82 37.8
TWI12G1108 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.2e-07 59.7 138 26.8
CiPaw.05G005200 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.2e-07 59.3 198 24.7
ECA240G2379 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.2e-07 59.3 127 29.1
TAR371G0903 Trochodendron aralioides HOM05D000045 ORTHO05D000067 4.2e-07 59.3 124 32.3
Nitab4.5_0002232g0080 Nicotiana tabacum HOM05D000045 ORTHO05D000067 7.1e-07 58.5 190 25.3
PSO017G5661 Papaver somniferum HOM05D000045 ORTHO05D000067 7.1e-07 58.5 173 28.3
Atru.chr2.2016 Acer truncatum HOM05D000045 ORTHO05D000067 1.6e-06 57.4 119 27.7
Peaxi162Scf00856g00315 Petunia axillaris HOM05D000045 ORTHO05D002701 1.6e-06 57.4 100 33.0
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 1.6e-06 57.4 138 27.5
CAN.G362.28 Capsicum annuum HOM05D004033 ORTHO05D002701 2.1e-06 57.0 69 40.6
CiPaw.06G154700 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-06 57.0 167 26.9
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 2.1e-06 57.0 118 29.7
Cpa.g.c45591 Carica papaya HOM05D000045 ORTHO05D002701 2.7e-06 56.6 136 29.4
ECA240G0947 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.7e-06 56.6 115 28.7
CSS0018417 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.5e-06 56.2 99 30.3
CANSAT56G2885 Cannabis sativa HOM05D000045 ORTHO05D000067 3.5e-06 56.2 127 26.8
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.5e-06 56.2 108 27.8
Atru.chr11.229 Acer truncatum HOM05D000045 ORTHO05D002701 4.6e-06 55.8 124 27.4
Atru.chr2.3305 Acer truncatum HOM05D000045 ORTHO05D002701 4.6e-06 55.8 135 27.4
CSS0014163 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-06 55.8 99 30.3
Nitab4.5_0001727g0220 Nicotiana tabacum HOM05D004033 ORTHO05D285273 4.6e-06 55.8 40 87.5
PSO210G6153 Papaver somniferum HOM05D000045 ORTHO05D000067 4.6e-06 55.8 127 30.7
TWI73G0003 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.6e-06 55.8 121 27.3
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.0e-06 55.5 108 28.7
PSO017G4977 Papaver somniferum HOM05D000045 ORTHO05D000067 6.0e-06 55.5 241 23.7
Potri.006G039700 Populus trichocarpa HOM05D001299 ORTHO05D013156 6.0e-06 55.5 110 32.7
CSS0010009 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-06 55.1 99 30.3
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 7.8e-06 55.1 229 27.9
Sabra06G0026800 Salix brachista HOM05D001299 ORTHO05D013156 7.8e-06 55.1 110 32.7
SabraUnG0002400 Salix brachista HOM05D001299 ORTHO05D013156 7.8e-06 55.1 110 32.7


User provided reference genes

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