Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 5.1e-51 204.1 105 100.0
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 3.1e-32 141.7 105 79.0
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.5e-26 122.9 87 80.5
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.5e-26 122.9 87 80.5
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 3.5e-23 111.7 87 71.3
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 3.5e-23 111.7 91 72.5
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.1e-21 106.7 87 67.8
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 1.1e-21 106.7 84 71.4
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 4.2e-21 104.8 87 72.4
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 5.5e-21 104.4 91 68.1
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 7.2e-21 104.0 86 70.9
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 2.1e-20 102.4 86 70.9
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 2.7e-20 102.1 87 65.5
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 4.7e-20 101.3 89 66.3
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 6.1e-20 100.9 104 61.5
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 6.1e-20 100.9 87 64.4
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 6.1e-20 100.9 87 64.4
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.1e-20 100.9 87 69.0
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 8.0e-20 100.5 87 65.5
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 8.0e-20 100.5 87 69.0
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.4e-19 99.8 88 69.3
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 2.3e-19 99.0 87 67.8
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.3e-19 99.0 87 63.2
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 2.3e-19 99.0 91 64.8
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 2.3e-19 99.0 87 66.7
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 4.0e-19 98.2 87 69.0
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 4.0e-19 98.2 87 67.8
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 6.8e-19 97.4 91 61.5
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 8.8e-19 97.1 85 67.1
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 8.8e-19 97.1 100 58.0
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.0e-18 95.9 87 63.2
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.6e-18 95.5 85 65.9
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 4.4e-18 94.7 89 62.9
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.4e-18 94.7 87 62.1
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 5.7e-18 94.4 88 67.0
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 5.7e-18 94.4 85 61.2
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.7e-18 94.4 85 61.2
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 7.5e-18 94.0 86 62.8
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 7.5e-18 94.0 87 64.4
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 7.5e-18 94.0 87 62.1
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 9.8e-18 93.6 92 60.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.3e-17 93.2 95 57.9
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.3e-17 93.2 87 65.5
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.7e-17 92.8 83 63.9
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 2.8e-17 92.0 87 62.1
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 2.8e-17 92.0 86 65.1
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.8e-17 92.0 83 66.3
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 3.7e-17 91.7 83 67.5
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 3.7e-17 91.7 87 65.5
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 4.8e-17 91.3 87 59.8
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 6.3e-17 90.9 88 58.0
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 8.3e-17 90.5 87 62.1
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 1.1e-16 90.1 87 58.6
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.1e-16 90.1 94 59.6
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.4e-16 89.7 69 76.8
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.4e-16 89.7 87 57.5
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 1.8e-16 89.4 87 57.5
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 2.4e-16 89.0 88 61.4
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 2.4e-16 89.0 85 58.8
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.1e-16 88.6 87 58.6
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 3.1e-16 88.6 86 61.6
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 7.0e-16 87.4 57 78.9
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 9.1e-16 87.0 87 56.3
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 9.1e-16 87.0 85 56.5
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 1.2e-15 86.7 87 62.1
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.2e-15 86.7 86 58.1
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.2e-15 86.7 86 58.1
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.2e-15 86.7 84 65.5
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 2.7e-15 85.5 86 61.6
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 2.7e-15 85.5 81 59.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 3.5e-15 85.1 89 57.3
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 4.5e-15 84.7 86 57.0
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 4.5e-15 84.7 84 63.1
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 4.5e-15 84.7 80 62.5
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 5.9e-15 84.3 86 57.0
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 5.9e-15 84.3 86 57.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 5.9e-15 84.3 57 78.9
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 7.7e-15 84.0 88 58.0
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 7.7e-15 84.0 87 60.9
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.7e-14 82.8 43 93.0
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.7e-14 82.8 43 93.0
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 3.8e-14 81.6 87 58.6
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 3.8e-14 81.6 87 54.0
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 3.8e-14 81.6 86 58.1
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 3.8e-14 81.6 83 56.6
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 6.5e-14 80.9 86 59.3
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 6.5e-14 80.9 87 52.9
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 8.5e-14 80.5 86 59.3
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 8.5e-14 80.5 86 59.3
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 8.5e-14 80.5 86 59.3
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 8.5e-14 80.5 53 81.1
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.1e-13 80.1 86 57.0
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.1e-13 80.1 47 85.1
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.9e-13 79.3 85 58.8
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.5e-13 79.0 87 56.3
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 3.2e-13 78.6 87 52.9
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 3.2e-13 78.6 83 56.6
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 4.2e-13 78.2 83 60.2
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 7.2e-13 77.4 52 76.9
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 1.2e-12 76.6 86 55.8
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 1.2e-12 76.6 42 83.3
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.6e-12 76.3 88 53.4
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 1.6e-12 76.3 42 83.3
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 3.6e-12 75.1 85 54.1
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 4.7e-12 74.7 83 51.8
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 6.1e-12 74.3 84 52.4
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.4e-11 73.2 67 59.7
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 5.2e-11 71.2 50 68.0
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 3.7e-09 65.1 43 83.7
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 3.7e-09 65.1 43 83.7
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 8.3e-09 63.9 85 50.6


User provided reference genes

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